Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., Methyl-accepting chemotaxis protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  301 bits (771), Expect = 5e-86
 Identities = 172/327 (52%), Positives = 232/327 (70%), Gaps = 5/327 (1%)

Query: 299 RKMVVNEVKRVMT---ALSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVA 355
           R  ++N + RV+T    ++SGDL+  LT     E  EL   +     +L   +T +   +
Sbjct: 213 RHALLNPLARVITHIREIASGDLTKTLTVSGRNEIGELAGTVEHMQRSLIDTVTQVREGS 272

Query: 356 ATIKLAATEISNGNTDLSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANILAGKAT 415
             I    +EI+ GNTDLSSRTEQQAS LE+TA+SME+L +TV+QN+DNA QA+ LA  A+
Sbjct: 273 DAIYSGTSEIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADNARQASQLAQSAS 332

Query: 416 EIAASGGELIEQVVVTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGR 475
           E A  GG++++ VV TM  I +S++KIADII VIDGIAFQTNILALNAAVEAARAGEQGR
Sbjct: 333 ETARHGGKVVDGVVNTMHEIADSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGR 392

Query: 476 GFSVVASEVRSLAQRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHD 535
           GF+VVA EVR+LA RSA AAK+IKALI DSVS++  G+ LV+ +G TM DIV ++ RV D
Sbjct: 393 GFAVVAGEVRNLASRSAQAAKEIKALIEDSVSRVDTGSVLVESAGETMTDIVNAVTRVTD 452

Query: 536 LMADIASASAEQATGINEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAEQLYDHVAM 595
           +M +IASAS EQ+ GI++V  AV++MD +TQQNA+LV+E+AAA+ +L  QA +L   V+ 
Sbjct: 453 IMGEIASASDEQSRGIDQVALAVSEMDRVTQQNASLVQESAAAAAALEEQASRLTQAVSA 512

Query: 596 FRLPDQD--TSAPSLLKAVNKRPQSAP 620
           FRL  +    + P +  +VN +  + P
Sbjct: 513 FRLASRPLAVNKPEMRLSVNAQSGNTP 539