Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., methyl-accepting chemotaxis protein II from Escherichia coli ECRC62

 Score =  298 bits (762), Expect = 6e-85
 Identities = 175/365 (47%), Positives = 246/365 (67%), Gaps = 28/365 (7%)

Query: 299 RKMVVNEVKRVMT---ALSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVA 355
           R+M++  + +++     ++ G+L+  LT     E  +L + +S    +L   +T +   +
Sbjct: 213 RRMLLTPLAKIIAHIREIAGGNLANTLTIDGRSEMGDLAQSVSHMQRSLTDTVTHVREGS 272

Query: 356 ATIKLAATEISNGNTDLSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANILAGKAT 415
             I     EI+ GNTDLSSRTEQQAS LE+TA+SME+L +TV+QN+DNA QA+ LA  A+
Sbjct: 273 DAIYAGTREIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADNARQASQLAQSAS 332

Query: 416 EIAASGGELIEQVVVTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGR 475
           + A  GG++++ VV TM  I +S++KIADII VIDGIAFQTNILALNAAVEAARAGEQGR
Sbjct: 333 DTAQHGGKVVDGVVKTMHEIADSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGR 392

Query: 476 GFSVVASEVRSLAQRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHD 535
           GF+VVA EVR+LA RSA AAK+IKALI DSVS++  G+ LV+ +G TM +IV ++ RV D
Sbjct: 393 GFAVVAGEVRNLASRSAQAAKEIKALIEDSVSRVDTGSVLVESAGETMNNIVNAVTRVTD 452

Query: 536 LMADIASASAEQATGINEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAEQLYDHVAM 595
           +M +IASAS EQ+ GI++V  AV++MD +TQQNA+LV+E+AAA+ +L  QA +L   V+ 
Sbjct: 453 IMGEIASASDEQSRGIDQVALAVSEMDRVTQQNASLVQESAAAAAALEEQASRLTQAVSA 512

Query: 596 FRLPDQDTSAPSLLKAVNKRPQSAPVTRHPASHIAKTPAKITAKASSRAQPVMQVA-HDE 654
           FRL                   ++P+T  P     +TP++  A     AQP +++A  D 
Sbjct: 513 FRL------------------AASPLTNKP-----QTPSR-PASEQPPAQPRLRIAEQDP 548

Query: 655 EWESF 659
            WE+F
Sbjct: 549 NWETF 553