Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 568 a.a., HAMP domain-containing protein from Dickeya dianthicola ME23

 Score =  288 bits (737), Expect = 5e-82
 Identities = 178/357 (49%), Positives = 238/357 (66%), Gaps = 18/357 (5%)

Query: 303 VNEVKRVMTALSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVAATIKLAA 362
           VN +   +  ++ GDL+    +    E   LG+ +     +L   +T +   A +I   A
Sbjct: 230 VNVLITRIQKIAQGDLTQPAENLGRNEIGILGQNLQYMQQSLTNTVTVVREGADSIYQGA 289

Query: 363 TEISNGNTDLSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANILAGKATEIAASGG 422
           +EIS GN DLSSRTEQQA+ LEQTA+SMEEL STV+QNSDNA  A+ LA  A+  A  GG
Sbjct: 290 SEISAGNVDLSSRTEQQAAALEQTAASMEELTSTVKQNSDNANHASQLARNASGKAEQGG 349

Query: 423 ELIEQVVVTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVAS 482
            +++ VV TM  I+ S++KIA+I  VI+ IAFQTNILALNAAVEAARAGEQGRGF+VVA 
Sbjct: 350 NIVQDVVKTMGDISSSSKKIAEITSVINSIAFQTNILALNAAVEAARAGEQGRGFAVVAG 409

Query: 483 EVRSLAQRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHDLMADIAS 542
           EVRSLAQRSA AAK+I++LI +S   +  G+ELV ++GSTM++IV ++  V D+M +IAS
Sbjct: 410 EVRSLAQRSAQAAKEIESLIGESGRLVDTGSELVAKAGSTMEEIVKAVVSVTDIMGEIAS 469

Query: 543 ASAEQATGINEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAEQLYDHVAMFRLPDQD 602
           AS EQ+ GI +VNQAV +M+  TQQNAALV+EA+AA+ SL +QAE+L   VA+F+L  + 
Sbjct: 470 ASDEQSRGIGQVNQAVLEMEGTTQQNAALVQEASAAAVSLESQAERLTQAVAVFKLSHRK 529

Query: 603 TSAPSLLKAVNKRPQSAPVTRHPASHIAKTPAKITAKASSRAQPVMQVAHDEEWESF 659
            S P +  ++  R  + PV   PA       A I A  +SR+        D  WE+F
Sbjct: 530 ESEP-VRASLPSRSVAQPV---PA------VAAIGAGGTSRS--------DRNWETF 568