Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 572 a.a., Tar ligand binding domain-containing protein from Dickeya dianthicola 67-19

 Score =  296 bits (757), Expect = 2e-84
 Identities = 176/376 (46%), Positives = 248/376 (65%), Gaps = 26/376 (6%)

Query: 289 VVKYATNVTQRKMVVNEVKRVMTAL---SSGDLSAQLTHPFEGEFAELGEVISQFIVTLR 345
           +V   T +  R++++  ++ ++  +   +SG+L+  L     GE  +LG+ +     +L 
Sbjct: 218 LVSLFTYLCLRRVIIKPMRSLVERIEHIASGNLTMPLAQWGRGEVGQLGQYLQNMQQSLA 277

Query: 346 QIITDINSVAATIKLAATEISNGNTDLSSRTEQQASNLEQTASSMEELNSTVRQNSDNAM 405
           + ++++      I    TEIS GN+DLSSRTE+QAS LEQTASSMEEL STVR N+DNA 
Sbjct: 278 RTVSNVRHGVDAIYQGITEISAGNSDLSSRTEEQASALEQTASSMEELTSTVRHNADNAN 337

Query: 406 QANILAGKATEIAASGGELIEQVVVTMASINESAQKIADIIGVIDGIAFQTNILALNAAV 465
            A+ LAG A+  A  GGEL++ VV TM +I++S++KI++I  +I+GIAFQTNILALNAAV
Sbjct: 338 HASQLAGDASGKARHGGELVDSVVKTMGNIHQSSKKISEITNIINGIAFQTNILALNAAV 397

Query: 466 EAARAGEQGRGFSVVASEVRSLAQRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKD 525
           EAARAGEQGRGF+VVA EVRSLAQRSA AAK+I+ LI++SV+ +  G+  V R+G TM+D
Sbjct: 398 EAARAGEQGRGFAVVAGEVRSLAQRSAQAAKEIEGLITESVALVETGSGQVSRAGETMQD 457

Query: 526 IVVSIKRVHDLMADIASASAEQATGINEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQ 585
           IV ++  V D+MA+I+ AS EQ+ GI++V QA+N +D +TQQNAALVE+A AA+ SL  Q
Sbjct: 458 IVSAVTSVTDIMAEISVASQEQSKGIDQVGQAINSIDNVTQQNAALVEQATAAATSLAEQ 517

Query: 586 AEQLYDHVAMFRLPDQDTSAPSLLKAVNKRPQSAPVTRHPASHIAKTPAKITAKASSRAQ 645
           A  L + V+ FR+   +                    R PA +IA  PA   A A  +A 
Sbjct: 518 AAGLNEAVSAFRIDGAE--------------------RRPAVNIAARPASSQA-ALPKAL 556

Query: 646 PVMQVA--HDEEWESF 659
           P  + A   ++ WE+F
Sbjct: 557 PGAKKAKSSNDGWETF 572



 Score = 26.6 bits (57), Expect = 0.003
 Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 21/105 (20%)

Query: 533 VHDLMADIASASAEQATGINEVNQAV-NQMDEMTQQNAALVEEAAAASESLLAQAEQLYD 591
           VH LM   +++S    T   +V   V N  + +      L++ AAAA E           
Sbjct: 44  VHFLMR--SNSSLNDVTAEIQVRLGVSNSSNHLRTARLMLIQAAAAAKEG---------- 91

Query: 592 HVAMFRLPDQDTSAPSLLKAVNKRPQSAPVTRHPASHIAKTPAKI 636
                   D+DT++ S+ +A  +  QSA       S   KTPA +
Sbjct: 92  --------DKDTASSSIQQAEGRLKQSADSFAAYQSREVKTPADL 128