Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., methyl-accepting chemotaxis protein from Dickeya dadantii 3937

 Score =  311 bits (796), Expect = 6e-89
 Identities = 171/311 (54%), Positives = 231/311 (74%), Gaps = 8/311 (2%)

Query: 312 ALSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVAATIKLAATEISNGNTD 371
           A++ GDL+  +      E A +   +S    +L +I+T +   A ++ +A+ EI++GN D
Sbjct: 223 AVADGDLTYPINASGRDEIATVLNALSHMQSSLIRIVTQVRHGAESVGVASGEIAHGNHD 282

Query: 372 LSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANILAGKATEIAASGGELIEQVVVT 431
           LS+RTE QAS LEQTA+SME+L++TV+QN+DNA+QAN LA  A+++A  GGE++ QVV T
Sbjct: 283 LSARTESQASALEQTAASMEQLSATVKQNADNALQANQLAQTASQVAEQGGEVVTQVVDT 342

Query: 432 MASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVASEVRSLAQRS 491
           M  IN+SAQ+IADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVA EVR+LAQRS
Sbjct: 343 MREINDSAQRIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVAGEVRALAQRS 402

Query: 492 ANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHDLMADIASASAEQATGI 551
           A +A++IK LIS SV +I +G+ L D +G TM+D+V SI+RV D+M +I+SAS+EQ++G+
Sbjct: 403 AESAREIKTLISASVERIESGSALADNAGHTMQDVVDSIRRVTDIMGEISSASSEQSSGV 462

Query: 552 NEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAEQLYDHVAMFRL--------PDQDT 603
           ++V +AV  M+  TQQNAALVEE AAA+ SL  QAE+L   V +FRL        PD   
Sbjct: 463 SQVGEAVVSMERTTQQNAALVEEMAAAAGSLNGQAEELVQAVGVFRLAGKAPGVRPDSGV 522

Query: 604 SAPSLLKAVNK 614
           +   LL + ++
Sbjct: 523 AGHELLLSYSR 533



 Score = 35.4 bits (80), Expect = 7e-06
 Identities = 46/224 (20%), Positives = 96/224 (42%), Gaps = 19/224 (8%)

Query: 376 TEQQASNLEQTASSMEELNSTVRQNSDNAMQAN-------ILAGKATEIAASGGELIEQV 428
           T ++A   +Q A +++  +    Q +D A++A        +   K + +   G  L+ Q+
Sbjct: 103 TPEEARLADQFADNLQRYDREGVQPTDAAIRAGRMEQAMRLYDDKVSTLEKQGHALLSQL 162

Query: 429 VVTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVASEVRSLA 488
           V    ++ +      +  G +    +    LA+  AV A  AG    G+ +V S VRSLA
Sbjct: 163 VTLQVNVAKD-----EYTGSVQRYQW-LKALAI-VAVLAGIAGAALFGWLMVRSIVRSLA 215

Query: 489 QRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHDLMADIASASAEQA 548
           Q  A A       ++  ++  ++G + +    + +  +  S+ R+   +  +   +    
Sbjct: 216 QAQAAAEAVADGDLTYPIN--ASGRDEIATVLNALSHMQSSLIRI---VTQVRHGAESVG 270

Query: 549 TGINEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAEQLYDH 592
               E+    + +   T+  A+ +E+ AA+ E L A  +Q  D+
Sbjct: 271 VASGEIAHGNHDLSARTESQASALEQTAASMEQLSATVKQNADN 314