Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 651 a.a., HAMP domain-containing protein from Dickeya dadantii 3937

 Score =  285 bits (730), Expect = 4e-81
 Identities = 163/347 (46%), Positives = 234/347 (67%), Gaps = 18/347 (5%)

Query: 313 LSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVAATIKLAATEISNGNTDL 372
           ++ GDL+A +T   + E  +L   ++     LR +I  I    + +  AA+EI+ GNTDL
Sbjct: 323 IAQGDLTASITVTRKDELGQLMSAMNAMNHKLRDMIGTIREGVSNVASAASEIAAGNTDL 382

Query: 373 SSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANILAGKATEIAASGGELIEQVVVTM 432
           SSRTEQQ++ + +TA+SME+L STV+QN+DNA  A+ LA  A+  A  GG+++  VV TM
Sbjct: 383 SSRTEQQSAAVVETAASMEQLTSTVKQNADNAHHASQLAADASGNATKGGQIVTNVVSTM 442

Query: 433 ASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVASEVRSLAQRSA 492
             I  S+++I++I  VI+GIAFQTNILALNAAVEAARAGEQGRGF+VVA EVR+LAQRSA
Sbjct: 443 NEIATSSRRISEITSVINGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSA 502

Query: 493 NAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHDLMADIASASAEQATGIN 552
            AAK+I+ LI +SV++++ G+  V+ +G TM +I+ SI  VHD+M +IASAS EQ+ GIN
Sbjct: 503 QAAKEIETLIGESVTRVNTGSTQVESAGKTMDEIIRSIAHVHDIMGEIASASDEQSRGIN 562

Query: 553 EVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAEQLYDHVAMFRLPDQDTSAPSLLKAV 612
           +++ A+ +MD  TQQNAALVEE++AA+ SL  QA+ L   V++FRL   D+  P+  ++ 
Sbjct: 563 QISNAIAEMDATTQQNAALVEESSAAANSLEEQAQALEQAVSIFRLGHDDSHRPT--RSA 620

Query: 613 NKRPQSAPVTRHPASHIAKTPAKITAKASSRAQPVMQVAHDEEWESF 659
           +K          P +  AK P  +    +         + ++EWESF
Sbjct: 621 HK----------PGAVGAKKPLMLAGTGAGAR------SGNDEWESF 651