Pairwise Alignments
Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056
Subject, 606 a.a., methyl-accepting chemotaxis protein from Bosea sp. OAE506
Score = 373 bits (957), Expect = e-107
Identities = 226/588 (38%), Positives = 348/588 (59%), Gaps = 22/588 (3%)
Query: 72 IREHLALLECEPNGTICYASDAFAHLCRVSAEAMVGADFANLWRTHQQPS--VQRLLQDA 129
IR A++E + +GTI A++ F S + +VG ++ S +
Sbjct: 19 IRRSQAVIEFKLDGTILDANENFLKAVGYSRDEVVGKHHRMFVEESERGSRDYAAFWEQL 78
Query: 130 KKGHPVSAE-LQLSRSQEAIWIKADLYPIKAINGQLQNVVVLLQDITAAKLEKIDRSGQM 188
+G P+ L++++ IW+ A+ PI +G+ VV DITA + + GQ+
Sbjct: 79 NRGEPIEVPCLRMAKGGRRIWLLANYTPILNASGKAVKVVKFASDITARREAMANLEGQI 138
Query: 189 NAVNLTQAVIEFTLDGTILTANQNFLQTVGYQLDEIQGRHHSMFVDEQYKQSQEYQHFWQ 248
A+ +QAVIEF L G IL AN NFL VGY L EI+G+HH +FVD + S+ Y+ FW+
Sbjct: 139 AAIRKSQAVIEFDLAGHILDANDNFLSAVGYSLAEIKGKHHRLFVDPSEQGSETYRRFWE 198
Query: 249 RLRSGEFFVDEYKRFGKGGKEIWIQASYNPIMDSEGKPYKVVKYATNVTQRKMVVN---- 304
+L GEF +Y+R G+GG+EIW+QA+YNPI D+ GKP K+VK+AT++T K V N
Sbjct: 199 KLGRGEFDEGQYRRLGQGGREIWLQATYNPIFDAMGKPCKIVKFATDITASKRVQNALRA 258
Query: 305 ---EVKRVMTALSSGDLSAQLTHP-FEGEFAELGEVISQFIVTLRQII---TDINSVAAT 357
+ + V+ + +GDL+ +++ GE AEL +++ + QII T I +++
Sbjct: 259 AVADTRGVVQSAMAGDLTRRISLAGMTGEIAELCGGVNELVDAFAQIIGTVTTITTISQD 318
Query: 358 IKLAATEISNGNTDLSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANILAGKATEI 417
I + A I G+ +L+ + E QA +L++ A++ + L+++V++++ A +A L A I
Sbjct: 319 IIVGADRIGLGSRELALQAEAQADSLQEAATTTDALSASVKRSAGRAREATSLGEAANGI 378
Query: 418 AASGGELIEQVVVTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGF 477
A GG ++ + V M I +++ IA+II VID IAFQTN+LALNAAVEAARAG G+GF
Sbjct: 379 ANRGGGIVGEAVGAMERIEKASGDIAEIITVIDNIAFQTNLLALNAAVEAARAGAAGKGF 438
Query: 478 SVVASEVRSLAQRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHDLM 537
+VVASEVR+LAQRS++AA DIKALIS+S +++ G LV +G+ + +IV S V +
Sbjct: 439 AVVASEVRALAQRSSDAANDIKALISNSTQQVATGVRLVKDAGAALAEIVGSSTSVAAAL 498
Query: 538 ADIASASAEQATGINEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAEQLYDHVAMFR 597
ADI+SAS EQA GI EV + V MD+MTQ+N+++ E++A + L ++L V F
Sbjct: 499 ADISSASNEQANGIGEVAKVVAHMDDMTQRNSSMAEQSANVARELQQATDELKRMVERFT 558
Query: 598 LPDQDTSAPSLLKAVNKRPQSAPVTRHPASHIAKTPAKITAKASSRAQ 645
+ + +P S P + A+ IA + T KAS+R +
Sbjct: 559 VGGTPSRSP-------VAASSMPAAKAAAARIAPSQG-TTPKASARRE 598
Score = 137 bits (346), Expect = 1e-36
Identities = 105/406 (25%), Positives = 186/406 (45%), Gaps = 63/406 (15%)
Query: 185 SGQMNAVNLTQAVIEFTLDGTILTANQNFLQTVGYQLDEIQGRHHSMFVDEQYKQSQEYQ 244
+G+ A+ +QAVIEF LDGTIL AN+NFL+ VGY DE+ G+HH MFV+E + S++Y
Sbjct: 13 AGEWAAIRRSQAVIEFKLDGTILDANENFLKAVGYSRDEVVGKHHRMFVEESERGSRDYA 72
Query: 245 HFWQRLRSGEFFVDEYKRFGKGGKEIWIQASYNPIMDSEGKPYKVVKYATNVTQRKMVVN 304
FW++L GE R KGG+ IW+ A+Y PI+++ GK KVVK+A+++T R+ +
Sbjct: 73 AFWEQLNRGEPIEVPCLRMAKGGRRIWLLANYTPILNASGKAVKVVKFASDITARREAMA 132
Query: 305 EVKRVMTALSSG------DLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVAATI 358
++ + A+ DL+ + + + +G +++ ++ D + +
Sbjct: 133 NLEGQIAAIRKSQAVIEFDLAGHILDANDNFLSAVGYSLAEIKGKHHRLFVDPSEQGSET 192
Query: 359 ------KLAATEISNGN----------------------------------TDLSSRTEQ 378
KL E G TD+++
Sbjct: 193 YRRFWEKLGRGEFDEGQYRRLGQGGREIWLQATYNPIFDAMGKPCKIVKFATDITASKRV 252
Query: 379 QASNLEQTASSMEELNSTVRQNSDNAMQANILAGKATEIAASGGELIE---QVVVTMASI 435
Q + A + + S + + + + G+ E+ EL++ Q++ T+ +I
Sbjct: 253 QNALRAAVADTRGVVQSAMAGDLTRRISLAGMTGEIAELCGGVNELVDAFAQIIGTVTTI 312
Query: 436 NESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVASEVRSLAQRSANAA 495
+Q DII D I + LAL A +A E +++ V+ RSA A
Sbjct: 313 TTISQ---DIIVGADRIGLGSRELALQAEAQADSLQEAATTTDALSASVK----RSAGRA 365
Query: 496 KDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHDLMADIA 541
++ + S+ + +NG + +R G + + V +++R+ DIA
Sbjct: 366 RE-----ATSLGEAANG--IANRGGGIVGEAVGAMERIEKASGDIA 404