Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., methyl-accepting chemotaxis protein from Agrobacterium fabrum C58

 Score =  382 bits (981), Expect = e-110
 Identities = 217/568 (38%), Positives = 336/568 (59%), Gaps = 22/568 (3%)

Query: 67  AFVQVIREHLALLECEPNGTICYASDAFAHLCRVSAEAMVGADFANLWRTHQQPSVQRLL 126
           A +  + +  A++E + +G I  A+D F   CR      +G + + +   H    V+   
Sbjct: 12  AVLAALSKSQAMIEFDLSGRILTANDNF---CRA-----LGYELSEIIGKHHSMFVEPAF 63

Query: 127 QDAKKGHPVSAEL-----------QLSRSQEAIWIKADLYPIKAINGQLQNVVVLLQDIT 175
             +       A+L           ++ +  + +WI+A   P+    G+   VV +  DIT
Sbjct: 64  VKSADYKAFWAKLAAGNFDQQQYKRIGKGGKEVWIEASYNPVMR-RGKPVKVVKIATDIT 122

Query: 176 AAKLEKIDRSGQMNAVNLTQAVIEFTLDGTILTANQNFLQTVGYQLDEIQGRHHSMFVDE 235
           A KL+  + +G++ A++  QA+IEFT  G +LTAN+NFL  +GY L EIQG+HHSMF + 
Sbjct: 123 AQKLKVAEDAGKIEALSRAQAIIEFTPTGDVLTANENFLSALGYSLSEIQGKHHSMFCEP 182

Query: 236 QYKQSQEYQHFWQRLRSGEFFVDEYKRFGKGGKEIWIQASYNPIMDSEGKPYKVVKYATN 295
            Y  S +Y++FW+ L  G+   DE+ R GKGG++++IQASYNPI D  G+ +KVVK+AT+
Sbjct: 183 SYTASPDYRNFWKMLAGGDLMADEFMRLGKGGRKVFIQASYNPIFDMNGRVFKVVKFATD 242

Query: 296 VTQRKMVVNEVKRVMTALSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVA 355
           VT R   V ++   + +L+ GDL+ Q+  PF      L    +     L++ +  +   A
Sbjct: 243 VTTRVENVEQLAGCLNSLADGDLAQQIEKPFIPSLERLRTDFNAASDKLKRAMATVADNA 302

Query: 356 ATIKLAATEISNGNTDLSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANILAGKAT 415
             I   ++EI     +L+ RTEQQA+++E+TA+++EE+ +TV+ +S  A +A  L  +  
Sbjct: 303 RAISAGSSEIRTAADELAKRTEQQAASVEETAAALEEITTTVKDSSRRAEEAGQLVARTR 362

Query: 416 EIAASGGELIEQVVVTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGR 475
           E A   GE++   +  M  I  S+++I++IIGVID IAFQTN LALNA VEAARAGE G+
Sbjct: 363 EHAEHSGEVVRDAIGAMDQIETSSREISNIIGVIDEIAFQTNHLALNAGVEAARAGEAGK 422

Query: 476 GFSVVASEVRSLAQRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHD 535
           GF+VVA EVR LAQRSA AAK+IK LI+ S S++ +G  LV ++GS +++I   +  ++ 
Sbjct: 423 GFAVVAQEVRELAQRSAKAAKEIKTLITSSGSQVQSGVSLVTKAGSALQEIATQVHDINT 482

Query: 536 LMADIASASAEQATGINEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAEQLYDHVAM 595
            +  I  A+ EQ+  + E+N+AVN +D+ TQQNAA+VEE  AAS SL  +A  L++ +  
Sbjct: 483 NVVAIVEAAREQSNALGEINKAVNSVDQGTQQNAAMVEEQTAASHSLAREAAALFELLEH 542

Query: 596 FRLPDQDTSAPSLLKAVNKRPQSAPVTR 623
           FR    D+           +P  APV +
Sbjct: 543 FRF--DDSGRTQAFAGQVHQPSVAPVAK 568