Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., DNA damage-inducible protein F from Xanthobacter sp. DMC5

 Score =  289 bits (740), Expect = 1e-82
 Identities = 159/415 (38%), Positives = 235/415 (56%), Gaps = 2/415 (0%)

Query: 17  HRQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFLRM 76
           HR+VLAIALPM L+++T PLLG+VDAAV+G L  A  LGGVAL + +  + FW+ GFLRM
Sbjct: 12  HRRVLAIALPMTLAHLTTPLLGVVDAAVVGRLGSASMLGGVALAAVIFDMLFWVFGFLRM 71

Query: 77  STTGLTAQAHGAQNSQQLARVLLQGSVIALGLAALFLLFHRPVAELIFHFSDASSEVKTY 136
            T GL AQA G +++ +   VL +G ++A  L  L +L   P+       + AS EV   
Sbjct: 72  GTVGLAAQAVGRRDAVEERAVLARGLLVAGALGLLIVLLRTPIESAALSLAGASDEVNVA 131

Query: 137 AEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLGLGLKV 196
              Y+ +R ++AP  L N+V+LGWL+G       + + +  N  N+VL   LVLG G  V
Sbjct: 132 VRDYYAVRIFAAPFTLANYVVLGWLVGLGRTGRALALQVGINFLNMVLSAALVLGAGWGV 191

Query: 197 EGAAIASVIADYAGLLFGLLCVGRYWRQHQLPAPFSFIPSLTKELSRLVALNRDIFLRSL 256
            G+A  +++A+ AG + GL+            A    +      LS+ V LNRDI +R+ 
Sbjct: 192 AGSAAGTLVAEIAGAVAGLILCAALLGGRLGVAKAVLLDK--ARLSQTVMLNRDIMIRTA 249

Query: 257 CLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEAMVGKAIGAKDDRQ 316
            L   FSF   QGA  GD  +AANA+L + +M+ +Y +DGFA A E + G A+GA+    
Sbjct: 250 ALMFAFSFFAAQGARAGDVTLAANAILQNMVMVAAYFLDGFATAAEQICGSAVGARRKSD 309

Query: 317 LRTAMISSTFWATMICLLLSLIFLGFGSDLIQMITNIPSVQATAEHYLPWLVAMPLIAVW 376
               +  S  W  +  +L  +++L  G  ++  ++  P V+A A  YL +   +P+  V 
Sbjct: 310 FSAGVRLSIVWGFVFAVLAGVVYLVTGPAIVDAMSTSPEVRAEARIYLLYAALLPVAGVT 369

Query: 377 CFLLDGVFIGATKGKEMRNSMAVSAVAFFAIYGFMTHYGNHALWLAMLSFMALRG 431
            +  DGV+IGA   ++MRN M  S V + A++  +   GNH LWLAML+F+  RG
Sbjct: 370 AYAFDGVYIGALWSRDMRNLMIASLVVYLAVFLALRPLGNHGLWLAMLAFLLARG 424