Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score = 69.7 bits (169), Expect = 2e-16
 Identities = 91/405 (22%), Positives = 178/405 (43%), Gaps = 31/405 (7%)

Query: 18  RQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFLRMS 77
           R +L +ALP+++  +    +  VDA + G +     L  V LG+++    + L+    ++
Sbjct: 19  RGLLTLALPIMIGQLATTAMSFVDAVMAGRVSPQ-DLAAVGLGNSIWIPVYLLMTGTLLA 77

Query: 78  TTGLTAQAHGAQNSQQLARVLLQGSVIAL--GLAALFLLFHRPVAELIFHFSDASSEVKT 135
           TT   AQ +GA    ++  ++ Q   +A+  G+ A  LL     AE I H  +   ++  
Sbjct: 78  TTPKVAQRYGAGQFSEIGPLVRQSLWLAVVVGITASLLLL---CAEPILHVMNVEPDLIE 134

Query: 136 YAEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLG-LGL 194
            +  Y +  A   PA  L +VL  +  G    R  M M +     NI L+ + + G LG+
Sbjct: 135 PSMGYLHGIAAGMPAIALYYVLRCFSDGLGRTRPSMVMGLCGLALNIPLNYIFIYGHLGV 194

Query: 195 KVEGAA---IASVIADYAGLLFGLLCVGRYWRQHQLPAPFS-FIPSLTKELSRLVALNRD 250
              G      A+ IA +  ++ GL    R+   +Q    +  F       + R++++   
Sbjct: 195 PAMGGVGCGWATAIAMWV-MMLGLAVWTRWGPAYQSSELYKRFDWPQWAVIKRVLSIGLP 253

Query: 251 IFLRSLCLQAVFSFMTFQGAALGDDIVAANAVLM---SFLMMISYGMDGFAYAMEAMVGK 307
           I +      ++F+ +     +LG  +V+ + + +   S + MI Y +   + A+   VG+
Sbjct: 254 IGIAIFAESSIFAVIALLIGSLGATVVSGHQIALNVSSLVFMIPYSL---SMAVTVRVGQ 310

Query: 308 AIGAKDDRQLRTA----MISSTFWATMICLLLSLIFLGFGSDLIQMITNIPSVQATAEHY 363
           A+G  + R+ R A    M ++  +A + C L+ L    F   +  + T  P V     H 
Sbjct: 311 ALGRGEPREARFAAGVGMGTALAYACLSCSLMLL----FREQIAAIYTPDPVV----IHL 362

Query: 364 LPWLVAMPLIAVWCFLLDGVFIGATKG-KEMRNSMAVSAVAFFAI 407
              L+    +  +   +     GA +G ++ R +M ++  A++ +
Sbjct: 363 ASMLIVFSALFQFSDSIQVTAAGALRGYQDTRVTMVLTLFAYWGV 407