Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

 Score = 66.6 bits (161), Expect = 2e-15
 Identities = 92/447 (20%), Positives = 168/447 (37%), Gaps = 43/447 (9%)

Query: 20  VLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFL----- 74
           ++ +A P++++++    +G VD  + G +        + + +  I+ + WL   L     
Sbjct: 11  LIKLATPVLIASVAQTGMGFVDTIMAGGVS------AIDMAAVSIAASIWLPSILFGVGL 64

Query: 75  RMSTTGLTAQAHGAQNSQQLARVLLQGSVIAL--GLAALFLLFHRPVAELIFHFSDASSE 132
            M+   + AQ +GA    ++   + QG ++AL   +  + +LF     + I  F D    
Sbjct: 65  LMALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQ---TQFIIRFMDVEEA 121

Query: 133 VKTYAEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLGL 192
           + T    Y +   ++ PA LL   L  +  G    +  M +  I  L NI L+ + V G 
Sbjct: 122 MATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGK 181

Query: 193 GLKVE----GAAIASVIADYAGLLFGLLCVGRYWRQHQLPAPFSFIPSLTKELSRLVALN 248
               E    G  +A+ I  +  LL  L  +    R   +    +F     KEL RL  L 
Sbjct: 182 FGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLG 241

Query: 249 RDIFLRSLCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEAMVGKA 308
             +         +F+ +    A LG  +VAA+ V ++F  ++         A+   VG  
Sbjct: 242 FPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHK 301

Query: 309 IGAKDDRQLRTAMISSTFWATMICLLLSLIFLGFGSDLIQMITNIPSVQATAEHYLPWLV 368
           +G +D +    A             + +L+ + F   +  + T    V A A   L    
Sbjct: 302 LGEQDTKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLL---- 357

Query: 369 AMPLIAVWCFLLDGVFI---GATKGKEMRNSMAVSAVAFFAIYGFMTHY----------- 414
              L A     +D V +   G+ +G +   ++       + + G  T Y           
Sbjct: 358 ---LFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQ 414

Query: 415 --GNHALWLAMLSFMALRGFTLGATFY 439
             G    WL  +  ++     LG   Y
Sbjct: 415 PLGAKGFWLGFIIGLSAAALMLGQRLY 441