Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., Na+-driven multidrug efflux pump from Sphingobium sp. HT1-2

 Score = 67.0 bits (162), Expect = 1e-15
 Identities = 105/458 (22%), Positives = 188/458 (41%), Gaps = 41/458 (8%)

Query: 11  LKQPNVHRQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWL 70
           L Q  +   +L  A+P + SNI   L G ++A  +G       L   A  + ++ + F +
Sbjct: 11  LTQGPIASTLLTFAIPTLASNILQSLNGSINAIWVGRFLGPQALAATANANIIMFLMFSV 70

Query: 71  LGFLRMSTTGLTAQAHGAQNSQQLARVLLQGSVI------ALGLAALFLLFHRPVAELIF 124
           +    M++T + AQA GA++     R    GS +      A+G+A         +  L+ 
Sbjct: 71  VFGFGMASTVMIAQAVGARDMDAARRAF--GSAVGFCFLLAMGVAVAGWFGGPALLHLLA 128

Query: 125 HFSDASSEVKTYAEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVL 184
              +A     TY    F     + PA+LL+ +++  L GT +AR P+  +I++   ++VL
Sbjct: 129 TPPEAFDMALTYLRVIFV----AMPASLLSVMMMMGLRGTGDARTPLIFMILSVAIDLVL 184

Query: 185 DLLLVLGLG----LKVEGAAIASVIADYAGLLFGLLCVGRYWRQHQL---PAPFSFIPSL 237
           + +L+LGLG    + + G+A A+  A +  L+   L +  Y +   L    A   ++   
Sbjct: 185 NPVLILGLGPIPAMGIGGSAAATAAAGFVSLI--ALVIYTYAKDLPLRLRGAELGYLRPA 242

Query: 238 TKELSRLVALNRDIFLRSLCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGF 297
             E+  L      + L+ + +      M       G  + AA          +       
Sbjct: 243 MDEMRVLSTKGLPMGLQMIVMSTSGLVMIGLVNREGFLVTAAYGAAQQIWTYLQMPAMAM 302

Query: 298 AYAMEAMVGKAIGA-KDDRQLRTAMISSTFWATMICLLLSLIFLGFGSDLIQMITNIPSV 356
             A+ AM  + IGA + DR  R      ++   +   ++ +I +   + L   +++  +V
Sbjct: 303 GAAVSAMAAQNIGAGRWDRISRITGYGISYLLAITGAMVVVILIFHEALLALFLSHNQAV 362

Query: 357 QATAEHYLPWLVAMPLIAVWCFLLDG---VFIGATKGKEMRNS-MAVSAVAFFAI----- 407
              A     W   M L+A W F+L G   +  G  +   +  + + +     FA+     
Sbjct: 363 IDAA-----W--NMQLLASWSFMLFGCTMILFGVMRANGVVVAPLLILVFTLFAVRLGFY 415

Query: 408 YGFMTHYGNHALWLAMLSFMALRGFTLGATFYTQ--WR 443
           Y      G  ALWL+     A+   TL A  Y Q  WR
Sbjct: 416 YLAYPRIGADALWLSFPVGSAV-SLTLAALVYWQGGWR 452