Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., MATE efflux family protein from Pseudomonas putida KT2440

 Score =  353 bits (906), Expect = e-102
 Identities = 198/430 (46%), Positives = 276/430 (64%), Gaps = 10/430 (2%)

Query: 17  HRQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFLRM 76
           HR+V A+A PM+LSNI+VPL+ LVD+ VIGHL HA  LG VA+G+T+ +    L+GFLRM
Sbjct: 14  HRKVWALAAPMILSNISVPLVALVDSTVIGHLPHAHQLGAVAVGATLFTFMVGLMGFLRM 73

Query: 77  STTGLTAQAHGAQNSQQLARVLLQGSVIALGLAALFLLFHRPVAELIFHFSDASSEVKTY 136
            +TG  AQA G  +   L +VL+QG ++A+G A L  L   P ++L  H    S+ ++  
Sbjct: 74  GSTGFAAQAAGRGDGAALRQVLVQGLLLAVGFALLIGLLALPFSQLALHAMQPSAALQQS 133

Query: 137 AEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLGLGLKV 196
            E +F+ R    PAAL ++ L+GW LGTQNARAP+ +++ TNL NI L+L  VLGL   V
Sbjct: 134 TEDFFHTRLLGLPAALASYALVGWFLGTQNARAPLAILLTTNLLNIALNLWFVLGLDWGV 193

Query: 197 EGAAIASVIADYAGLLFGLLCVGRYWRQHQLPAPFSFIPSLTKELSR---LVALNRDIFL 253
            G+A ASVIA+++  L GL       R +    P   + +  K       L+A+NRDIFL
Sbjct: 194 LGSARASVIAEWSAALLGLALTRPALRAY----PGQIVWAALKRWQAWRPLLAVNRDIFL 249

Query: 254 RSLCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEAMVGKAIGAKD 313
           RSL LQ VF  +T QGA LG+  VAANA+L++ L++ +Y +DG A+A+EA+ G AIGA+D
Sbjct: 250 RSLALQLVFLLITVQGARLGEATVAANALLLNGLLLTAYALDGLAHAVEALCGHAIGARD 309

Query: 314 DRQLRTAMISSTFWATMICLLLSLIFLGFGSDLIQMITNIPSVQATAEHYLPWLVAMPLI 373
              LR +++ +  W+ +  L  + +FL  G   I + T+I SV+A A  YLP+L  +PLI
Sbjct: 310 RDTLRRSLVVACGWSLITSLGFAGLFLLGGHLFIDLQTDIESVRAAAYPYLPYLALLPLI 369

Query: 374 AVWCFLLDGVFIGATKGKEMRNSMAVSAVAFFAIYGFMTHYGNHALWLAMLSFMALRGFT 433
           AVW +LLDG+FIGAT+ +EMRN+M VS +    +   M+  GNH LW+A L FM LR  T
Sbjct: 370 AVWSYLLDGLFIGATRAREMRNAMLVSVLIALPVAVAMSGLGNHGLWMAFLGFMGLRAVT 429

Query: 434 LGATFYTQWR 443
           LG   +  WR
Sbjct: 430 LG---WVGWR 436