Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., EmmdR/YeeO family multidrug/toxin efflux MATE transporter from Pantoea agglomerans CFBP13505 P0401

 Score = 72.4 bits (176), Expect = 3e-17
 Identities = 97/433 (22%), Positives = 169/433 (39%), Gaps = 28/433 (6%)

Query: 18  RQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFLRMS 77
           R++  +A+P+   N  V L+G++   ++  L     + GV L  +   V       + + 
Sbjct: 22  REISPLAVPIFFENACVLLMGVLSTFLVSWLGKE-AMAGVGLADSFNMVIISFFAAIDLG 80

Query: 78  TTGLTAQAHGAQNSQQLARVLLQGSVIALGLAALFLLFHRPVAELIFHF--SDASSEVKT 135
           TT + A +   +N ++      Q   +   LA + ++       LI       A  +VK 
Sbjct: 81  TTVVVAFSLAKRNGKRARAATRQSLAMMTILAFVLVIAIEFWGHLIVDAIAGAADPKVKA 140

Query: 136 YAEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLGL--- 192
            A +Y    AWS PAA +  +  G L G  N + PM +    N+ NI++  +L+ G    
Sbjct: 141 LALSYLQTSAWSYPAAAITLIGSGALRGAGNTKIPMLINGGMNILNIIISSVLIYGCFSW 200

Query: 193 -GLKVEGAAIASVIADYAGLL--FGLLCVGRYWRQHQLPAPFSFIPSLTKELSRLVALNR 249
            GL   GA +   I  Y G +    +L +G +    ++     F    +  L  ++ +  
Sbjct: 201 DGLGFIGAGLGLTITRYIGAIAVIYVLMIG-FNASLKITLSSYFRRWNSSILMEVLGIGV 259

Query: 250 DIFLRSLCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEAMVGKAI 309
              + S+             A +G   +A N +  S   +I+   +    A   + G  +
Sbjct: 260 PASIESVLFNGGKLLTQVFVAGMGTSEIAGNFIAFSIASLINLPGNALGSASTIITGTRL 319

Query: 310 GAKDDRQLRTAMISSTFWATMICL-LLSLIFLGFGSDLIQMITNIPSVQATAEHYLPWLV 368
           G     Q     +   FW   +CL  ++L+ +     L +  T+ P V       L WL 
Sbjct: 320 GRNQVFQAE-RQVRHVFWLATVCLTAMALLTVPLAGLLARFYTSDPEV-INVTKQLIWLN 377

Query: 369 A--MPLIAVWCFLLDGVFIGATKG-KEMRNSMAVSAVAFFA-------IYGFMTHYGNHA 418
           A  MPL A    L  G+     KG ++ R +M VS  + +        + G     G   
Sbjct: 378 ALFMPLWAASWVLPAGL-----KGARDARYTMYVSMFSMWGARVVVGYLLGIELGMGVTG 432

Query: 419 LWLAMLSFMALRG 431
           +WL M     +RG
Sbjct: 433 VWLGMFLDWTVRG 445