Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., putative efflux protein, MATE family from Kangiella aquimarina DSM 16071

 Score =  348 bits (893), Expect = e-100
 Identities = 188/439 (42%), Positives = 278/439 (63%), Gaps = 4/439 (0%)

Query: 11  LKQPNVHRQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWL 70
           LK+ + H  +  IALPM+LSN+TVPL+GLVD+AV+GHL   +YL  V LG+ + +   W 
Sbjct: 13  LKRTDQHSAIWRIALPMLLSNMTVPLVGLVDSAVMGHLPEPFYLAAVGLGAALFTFIVWT 72

Query: 71  LGFLRMSTTGLTAQAHGAQNSQQLARVLLQGSVIALGLAALFLLFHRPVAELIFHFSDAS 130
           +GFLRM TTGL AQA+GA++   + + L   S++ L +A L LL +  + +LI  + + S
Sbjct: 73  MGFLRMITTGLVAQAYGAEDHVAIRQWLWLSSLLGLSVAFLTLLLNPWLIDLILWWIEGS 132

Query: 131 SEVKTYAEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVL 190
            EV++   AY+  R W  P +LLN V++GW LG Q AR P WM++I NL N+VLDL  VL
Sbjct: 133 DEVESSVLAYWNTRIWGLPFSLLNAVMIGWFLGMQTARIPFWMLLIINLLNVVLDLYFVL 192

Query: 191 GLGLKVEGAAIASVIADYAGLLFGLLCVGRYWRQHQLPAPFSFIPSLTKELSRLVALNRD 250
           GLG+ VEG A+ASVIA+  G  FG   V R   ++ +   F        +L RL+ LN D
Sbjct: 193 GLGMTVEGVALASVIAEVIGCAFGGYHVIRLLAKYPIAEKFKL---AWHKLKRLLGLNGD 249

Query: 251 IFLRSLCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEAMVGKAIG 310
           + +R+L L+ VF  +  +GA LGD+++A N +L++FL++I+ G+DGFA A+EA+VGKAIG
Sbjct: 250 LLIRTLALELVFFTIHARGAELGDEVMAINVILLNFLLLIANGLDGFANAVEALVGKAIG 309

Query: 311 AKDDRQLRTAMISSTFWATMICLLLSLIFLGFGSDLIQMITNIPSVQATAEHYLPWLVAM 370
               R  R+++     W+ ++ ++ +LIF  F  + I +IT+I SV A +E Y  +++ M
Sbjct: 310 RNSWRDFRSSINVGGLWSLLVSIIFALIFWLFIEEFIGLITSIDSVIAASEPYHLYIIFM 369

Query: 371 PLIAVWCFLLDGVFIGATKGKEMRNSMAVSA-VAFFAIYGFMTHYGNHALWLAMLSFMAL 429
            L++VW F LDGVFIGA++   MRNSM ++  + F  +Y      GNH LWLA  +FM L
Sbjct: 370 ALVSVWSFWLDGVFIGASQIGAMRNSMLIAVLLGFVPLYFVTKSLGNHGLWLAFYAFMLL 429

Query: 430 RGFTLGATFYTQWRAGTFL 448
           R  +         +AG ++
Sbjct: 430 RALSSVLFLKLGIKAGAYI 448