Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 480 a.a., EmmdR/YeeO family multidrug/toxin efflux MATE transporter from Erwinia tracheiphila SCR3

 Score = 88.2 bits (217), Expect = 5e-22
 Identities = 111/456 (24%), Positives = 188/456 (41%), Gaps = 44/456 (9%)

Query: 18  RQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFLRMS 77
           R++  +A+P+   N+ V L+G++   ++  L     + GV L  +   V       + + 
Sbjct: 32  REITPLAVPIFFENLCVLLMGVLSTFLVSWLGKE-AMAGVGLADSFNMVVISFFAAIDLG 90

Query: 78  TTGLTAQAHGAQNSQQLARVLLQG----SVIALGLAALFLLFHRPVAELIFHFSDASSEV 133
           TT + A + G  N ++      Q     +V A+ LA    LF   + +LI    +A  +V
Sbjct: 91  TTVVVAFSLGKLNRERAEAATRQSLVLMTVFAILLATGIELFGEQIIDLIAE--NAEPQV 148

Query: 134 KTYAEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLGL- 192
           K  A  Y  I AWS PAA +  +  G L G  N + PM +    N+ NIV   +L+ G  
Sbjct: 149 KELALVYLGITAWSYPAAAIALIGCGALRGAGNTKIPMLINGGMNILNIVFSTVLIYGCF 208

Query: 193 ---GLKVEGAAIASVIADYAG--LLFGLLCVGRYWRQHQLPAPFSFIPSLTKELSRLVAL 247
              G+   GA +   ++ Y G   +  +L +G +  Q ++     F    T  L  ++ +
Sbjct: 209 GWKGMGFAGAGLGLTLSRYVGAVAVIYVLVIG-FNPQLKITLRSYFSRLDTGILKEVLGI 267

Query: 248 NRDIFLRSLCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEAMVGK 307
                + S+             A +G D++A N +  S   MI+   +        +VG 
Sbjct: 268 GVPASIESVLFNGGKLLTQVFVAGMGTDVIAGNFIAFSIASMINLPGNALGSTATIIVGT 327

Query: 308 AIG----AKDDRQLRTAMISSTFWATMICL-LLSLIFLGFGSDLIQMITNIPSVQATAEH 362
            +G     + +RQL+T      FW + +CL  L+ +       L    T    V    + 
Sbjct: 328 RLGKGQLGQPERQLKT-----IFWLSNLCLCFLAALSAPLAGVLASFYTQEDDVIHVVK- 381

Query: 363 YLPWLVA--MPLIAVWCFLLDGVFIGATKG-KEMRNSMAVSAVAFFA-------IYGFMT 412
            L WL A  MP+ A    L  G+     KG ++ R +M VS +  +          G M 
Sbjct: 382 ILIWLNAAFMPIWAASWVLPAGL-----KGARDARFTMWVSMLGMWGCRIIAGYTLGVML 436

Query: 413 HYGNHALWLAMLSFMALRGFTLGATFYTQWRAGTFL 448
            +G   +WL M+    +R       FY +  +G +L
Sbjct: 437 GFGVVGVWLGMVLDWIVRAI----FFYRRMTSGRWL 468