Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., putative efflux protein, MATE family from Enterobacter asburiae PDN3

 Score = 85.5 bits (210), Expect = 4e-21
 Identities = 109/456 (23%), Positives = 193/456 (42%), Gaps = 44/456 (9%)

Query: 18  RQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFLRMS 77
           R++  +A+P+ L N  V L+G++   ++  L     + GV L  +   V       + + 
Sbjct: 92  REITPLAVPIFLENTCVLLMGVLSTFLVSWLGKE-AMAGVGLADSFNMVVISFFAAIDLG 150

Query: 78  TTGLTAQAHGAQNSQQLARVLLQG----SVIALGLAALFLLFHRPVAELIFHFSDASSEV 133
           TT + A + G  + ++      Q     ++ ++ LAA+   F R + + +    +A++EV
Sbjct: 151 TTVVVAFSLGKLDPKRAREAARQSLMIMTIFSIVLAAVIHYFGREIIDFVA--GEATNEV 208

Query: 134 KTYAEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLGL- 192
           K  A  Y  +   S PAA +  +  G L G  N + P+ +    N+ NI++  +L+ G+ 
Sbjct: 209 KDLALTYLEMTVLSYPAAAIALIGSGALRGAGNTKIPLLINGGMNILNIIISSVLIYGVF 268

Query: 193 ---GLKVEGAAIASVIADYAG--LLFGLLCVGRYWRQHQLPAPFSFIPSLTKELSRLVAL 247
              GL   GA +   I+ Y G   + G+L  G      +L     F P     +  ++ +
Sbjct: 269 SWEGLGFVGAGLGLTISRYIGAVAIIGVLMAG-ITPSLRLTLKSYFRPFNFAIIWEVMGI 327

Query: 248 NRDIFLRSLCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEAMVGK 307
                + S+             A +G D++A N +  S   +I+   +    A   + GK
Sbjct: 328 GIPASIESVLFNGGKLLTQMFVAGMGTDVIAGNFIAFSIASLINLPGNALGSASTIITGK 387

Query: 308 AIG----AKDDRQLRTAMISSTFWATMICL-LLSLIFLGFGSDLIQMITNIPSVQATAEH 362
            +G     + +RQLR       FW + I L L++     F   +    T+   V+   + 
Sbjct: 388 RLGKGQIGQAERQLR-----HVFWLSTIGLTLIAWGTAPFAGLMASFYTHEDDVKEVVK- 441

Query: 363 YLPWLVA--MPLIAVWCFLLDGVFIGATKG-KEMRNSMAVSAVAFFA-------IYGFMT 412
            L WL A  MP+ A    L  G+     KG ++ R +M VS +  +          G M 
Sbjct: 442 ILIWLNAAFMPIWAASWVLPAGL-----KGARDARFAMWVSMLGMWGCRVVAGYTLGVML 496

Query: 413 HYGNHALWLAMLSFMALRGFTLGATFYTQWRAGTFL 448
            +G   +WL M    A+R    GA FY +  +G +L
Sbjct: 497 GWGVVGVWLGMFLDWAVR----GALFYWRMVSGRWL 528