Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., MATE family efflux transporter DinF from Escherichia coli ECRC62

 Score =  400 bits (1029), Expect = e-116
 Identities = 217/428 (50%), Positives = 283/428 (66%), Gaps = 1/428 (0%)

Query: 23  IALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFLRMSTTGLT 82
           +ALPM+ SNITVPLLGLVD AVIGHL+   YLGGVA+G+T  S  F LL FLRMSTTGLT
Sbjct: 14  LALPMIFSNITVPLLGLVDTAVIGHLDSPVYLGGVAVGATATSFLFMLLLFLRMSTTGLT 73

Query: 83  AQAHGAQNSQQLARVLLQGSVIALGLAALFLLFHRPVAELIFHFSDASSEVKTYAEAYFY 142
           AQA+GA+N Q LAR L+Q  ++ALG  AL  L   P+ +L  H    S  V   A  +  
Sbjct: 74  AQAYGAKNPQALARALVQPLLLALGAGALIALLRTPIIDLALHIVGGSEAVLEQARRFLE 133

Query: 143 IRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLGLGLKVEGAAIA 202
           IR  SAPA+L N VLLGWLLG Q ARAP+ ++++ N+ NIVLD+ LV+GL + V+GAA+A
Sbjct: 134 IRWLSAPASLANLVLLGWLLGVQYARAPVILLVVGNILNIVLDVWLVMGLHMNVQGAALA 193

Query: 203 SVIADYAGLLFGLLCVGRYWRQHQLPAPFSFIPSLTKELSRLVALNRDIFLRSLCLQAVF 262
           +VIA+YA LL GLL V +  +   +        +      RL+ALNRDI LRSL LQ  F
Sbjct: 194 TVIAEYATLLIGLLMVRKILKLRGISGEM-LKTAWRGNFRRLLALNRDIMLRSLLLQLCF 252

Query: 263 SFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEAMVGKAIGAKDDRQLRTAMI 322
             +T  GA LG DIVA NAVLM+ L   +Y +DGFAYA+EA  G+A GA+D  QL     
Sbjct: 253 GAITVLGARLGSDIVAVNAVLMTLLTFTAYALDGFAYAVEAHSGQAYGARDGSQLLDVWR 312

Query: 323 SSTFWATMICLLLSLIFLGFGSDLIQMITNIPSVQATAEHYLPWLVAMPLIAVWCFLLDG 382
           ++   + ++ LL S+++L  G  +I ++T++  +Q  A+ YL W V +PL+ VWC+LLDG
Sbjct: 313 AACRQSGIVALLFSVVYLLAGEHIIALLTSLTQIQQLADRYLIWQVILPLVGVWCYLLDG 372

Query: 383 VFIGATKGKEMRNSMAVSAVAFFAIYGFMTHYGNHALWLAMLSFMALRGFTLGATFYTQW 442
           +FIGAT+  EMRNSMAV+A  F      +   GNH LWLA+  F+ALRG +L A +   W
Sbjct: 373 MFIGATRAAEMRNSMAVAAAGFALTLLTLPWLGNHGLWLALTVFLALRGLSLAAIWRRHW 432

Query: 443 RAGTFLPA 450
           R GT+  A
Sbjct: 433 RNGTWFAA 440