Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., EmmdR/YeeO family multidrug/toxin efflux MATE transporter from Dickeya dianthicola ME23

 Score = 94.0 bits (232), Expect = 1e-23
 Identities = 105/450 (23%), Positives = 193/450 (42%), Gaps = 32/450 (7%)

Query: 18  RQVLAIALPMVLSNITVPLLGLVDAAVIGHL-EHAWYLGGVALGSTMISVTFWLLGFLRM 76
           R++  +A+P+ +  + V L+G+    ++  L + A    G+A    M+ + F+    + +
Sbjct: 31  REITPLAVPIFIEGLCVVLMGIFSTFLVSWLGKEAMAAVGLADSFNMLIIAFFTA--VAL 88

Query: 77  STTGLTAQAHGAQNSQQLARVLLQGS----VIALGLAALFLLFHRPVAELIFHFSDASSE 132
            T  + A + G +N +Q  +   Q      +I+L L  L     + + +LI +  +A   
Sbjct: 89  GTAVVVAFSLGQRNRKQARQAARQSISLLVLISLLLVGLVEFAGQTIIDLIAY--NAEPA 146

Query: 133 VKTYAEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLGL 192
           VK+ A  +  +  W  PA  +  V  G L G  N R PM + I  N+ NI+L  +L+ G+
Sbjct: 147 VKSLALTFLRLTVWGYPALAITLVGCGALRGAGNTRLPMIINIGMNILNILLSGVLIYGV 206

Query: 193 ----GLKVEGAAIASVIADYAGLLFGLLCVGRYWR-QHQLPAPFSFIPSLTKELSRLVAL 247
               G+   GA +   ++ Y G L  +L + + +    ++P    F P  T  L  ++++
Sbjct: 207 ASWQGVGFIGAGLGITLSRYLGALCVVLALTKGFNGALRIPFHSYFAPFTTTILYEVLSI 266

Query: 248 NRDIFLRSLCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEAMVGK 307
                + S+             A +G +++A N +  S + +I+   +        +VG 
Sbjct: 267 GIPASIESVMFNVGKLITQRFVAGMGTEVIAGNFIAFSIVALINLPGNALGSTSTIIVGS 326

Query: 308 AIGAKDDRQLRTAMISSTFWATMICL-LLSLIFLGFGSDLIQMITNIPSVQATAEHYLPW 366
            +G K  R      +   FW + + L  L+L+ +     +  M TN P V  T    L W
Sbjct: 327 RLG-KGQRMQSERQLKYIFWLSNVGLCALALLSVPTAGLMASMYTNEPDV-ITVVKQLIW 384

Query: 367 LVAMPLIAVWCFLLDGVFIGATKG-KEMRNSMAVSAVAFFA-------IYGFMTHYGNHA 418
           L A+  + +W      V     KG K+   +M V+    +        I G M  +G   
Sbjct: 385 LNAL-FMPIWA--ASWVLPAGLKGAKDASYTMWVALAGMWGCRVIAGYILGIMLGFGVIG 441

Query: 419 LWLAMLSFMALRGFTLGATFYTQWRAGTFL 448
           +W+ M     +R    GA FY +  +G +L
Sbjct: 442 VWMGMFFDWIVR----GALFYRRMVSGKWL 467