Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., EmmdR/YeeO family multidrug/toxin efflux MATE transporter from Dickeya dadantii 3937

 Score = 92.4 bits (228), Expect = 3e-23
 Identities = 102/448 (22%), Positives = 189/448 (42%), Gaps = 28/448 (6%)

Query: 18  RQVLAIALPMVLSNITVPLLGLVDAAVIGHL-EHAWYLGGVALGSTMISVTFWLLGFLRM 76
           R++  +A+P+ +  + V L+G+    ++  L + A    G+A    M+ + F+    + +
Sbjct: 31  REITPLAVPIFIEGLCVVLMGIFSTFLVSWLGKEAMAAVGLADSFNMLIIAFFTA--VAL 88

Query: 77  STTGLTAQAHGAQNSQQLARVLLQGSVIALGLAALFLLFHRPVAELIFHF--SDASSEVK 134
            T  + A + G +N +Q  +   Q   + + ++ L +       +LI     ++A   VK
Sbjct: 89  GTAVVVAFSLGQRNRKQARQAARQSISLLVLISLLLVGLVEFAGQLIIDLIANNAEPTVK 148

Query: 135 TYAEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLGL-- 192
           + A  +  +  W  PA  +  V  G L G  N R PM + I  N+ NI+L  +L+ G+  
Sbjct: 149 SLALTFLRLTVWGYPALAITLVGCGALRGAGNTRLPMIINIGMNILNILLSGVLIYGVSS 208

Query: 193 --GLKVEGAAIASVIADYAGLLFGLLCVGRYWR-QHQLPAPFSFIPSLTKELSRLVALNR 249
             G+   GA +   ++ Y G L  +L + + +    ++P    F P  T  L  ++++  
Sbjct: 209 WQGVGFVGAGLGITLSRYLGALCVVLALTKGFNGALRIPFQSYFAPFTTTILYEVLSIGI 268

Query: 250 DIFLRSLCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEAMVGKAI 309
              + S+             A +G +++A N +  S   +I+   +        +VG  +
Sbjct: 269 PASIESVMFNVGKLITQRFVAGMGTEVIAGNFIAFSIAALINLPGNALGSTATIIVGSRL 328

Query: 310 GAKDDRQLRTAMISSTFWATMICL-LLSLIFLGFGSDLIQMITNIPSVQATAEHYLPWLV 368
           G K  R      +   FW + + L  L+L  +     +  M TN P V  T    L WL 
Sbjct: 329 G-KGQRMQPERQLKYIFWLSNVGLCALALFSVPTAGLMASMYTNEPDV-ITVVKQLIWLN 386

Query: 369 AMPLIAVWCFLLDGVFIGATKG-KEMRNSMAVSAVAFFA-------IYGFMTHYGNHALW 420
           A+  + +W      V     KG K+   +M V+    +        I G M  +G   +W
Sbjct: 387 AL-FMPIWA--ASWVLPAGLKGAKDASYTMWVALAGMWGCRVIAGYILGIMLGFGVIGVW 443

Query: 421 LAMLSFMALRGFTLGATFYTQWRAGTFL 448
           + M     +R    GA FY +  +G +L
Sbjct: 444 MGMFLDWIVR----GALFYQRMVSGKWL 467