Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., putative efflux protein, MATE family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 67.0 bits (162), Expect = 1e-15
 Identities = 80/361 (22%), Positives = 155/361 (42%), Gaps = 37/361 (10%)

Query: 15  NVHRQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFL 74
           ++ + +  +++PM+L  +   L  +VD   +G L     +  V L  +++++ + +   L
Sbjct: 25  SIRKAIFYLSIPMILEMLMESLFAVVDIFFVGKL-GVQAVATVGLTESVLTIVYSVAIGL 83

Query: 75  RMSTTGLTAQAHGAQNSQQLARVLLQG----SVIALGLAALFLLFHRPVAELIFHFSDAS 130
            M+ T + A+  G +  +  ++   Q     +V+A+ +  L L F + +  L+       
Sbjct: 84  SMAATAVVARRIGEKKKKAASQAAFQAIIICAVLAMTIGVLGLFFAKDLLTLM------G 137

Query: 131 SEVKTYAEAYFYIRAWSAP--AALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLL 188
            +    A  + Y +   A   + +L F++ G   G  NA   M  + + N  NIVLD +L
Sbjct: 138 GDPALVASGFGYTQVIFAGNISVMLLFLINGVFRGAGNAVIAMRTLWLANGINIVLDPML 197

Query: 189 VLGLG----LKVEGAAIASVIADYAGLLFGLLCVGRYWRQHQLPAPFSFIPSL------- 237
           + G+G    L +EGAA A+ I    G+LF L  + R        A  SF   +       
Sbjct: 198 IFGIGFFPELGLEGAAWATTIGRSVGVLFQLSVLFRG------KAIISFNWDVLRFRWYT 251

Query: 238 TKELSRLVALNRDIFL-RSLCLQAVFSFMTFQGA-ALGDDIVAANAVLMSFLMMISYGMD 295
            K + ++       FL  S     +   ++  G+ AL    +A   ++ + L  +     
Sbjct: 252 VKNILKIAIGGMGQFLIESASWIVLMRIVSNSGSVALAGFTIAIRLIIFALLPAM----- 306

Query: 296 GFAYAMEAMVGKAIGAKDDRQLRTAMISSTFWATMICLLLSLIFLGFGSDLIQMITNIPS 355
           GF+ A   +VG+ +GAK   +   +   +  +  +    + L+F  FG  +I    + P 
Sbjct: 307 GFSNASATLVGQNLGAKRPDRAEQSAWKAAHYTALFLGSIGLLFFFFGEYIISWFNDNPE 366

Query: 356 V 356
           V
Sbjct: 367 V 367



 Score = 43.5 bits (101), Expect = 1e-08
 Identities = 29/116 (25%), Positives = 54/116 (46%)

Query: 272 LGDDIVAANAVLMSFLMMISYGMDGFAYAMEAMVGKAIGAKDDRQLRTAMISSTFWATMI 331
           LG   VA   +  S L ++     G + A  A+V + IG K  +    A   +     ++
Sbjct: 58  LGVQAVATVGLTESVLTIVYSVAIGLSMAATAVVARRIGEKKKKAASQAAFQAIIICAVL 117

Query: 332 CLLLSLIFLGFGSDLIQMITNIPSVQATAEHYLPWLVAMPLIAVWCFLLDGVFIGA 387
            + + ++ L F  DL+ ++   P++ A+   Y   + A  +  +  FL++GVF GA
Sbjct: 118 AMTIGVLGLFFAKDLLTLMGGDPALVASGFGYTQVIFAGNISVMLLFLINGVFRGA 173