Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., DNA-damage-inducible protein F from Alteromonas macleodii MIT1002

 Score =  330 bits (847), Expect = 4e-95
 Identities = 175/425 (41%), Positives = 262/425 (61%), Gaps = 6/425 (1%)

Query: 17  HRQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFLRM 76
           H ++LA+ALPM+L+NIT PLLGLVD AV+GH+     L G ++G+ +++  +W+ GFLRM
Sbjct: 15  HSRLLALALPMILANITTPLLGLVDTAVLGHMSLPAMLAGASVGALILTQIYWVCGFLRM 74

Query: 77  STTGLTAQAHGAQNSQ-QLARVLLQGSVIALGLAALFLLFHRPVAELIFHFSDASSEVKT 135
           S+TGL+AQA G+ N+  + A+VL Q   +AL L A+ L    P+  +    +  +SEV  
Sbjct: 75  SSTGLSAQAKGSPNNTLESAKVLWQTVAVALVLGAVVLALQSPILSIGLALTQPNSEVAL 134

Query: 136 YAEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLGLGLK 195
           + + YF  R W APAA+LN  L+GWL+G Q  R+ M + I+ NL N  LD++ V GLGL 
Sbjct: 135 HLQDYFSTRVWGAPAAMLNLALVGWLVGQQKTRSVMAIQIVGNLLNAGLDVVFVFGLGLS 194

Query: 196 VEGAAIASVIADYAGLLFGLLCVGRYWRQHQLPAPFSFIPSLTKELSRLVALNRDIFLRS 255
           V G A+ASVIA+Y   +  L     + R   +    S+     +++  L+ LN D+ LR+
Sbjct: 195 VAGVALASVIAEYTMAIMALAVA--FKRVGGVAVSASWFNRAARKV--LMKLNGDMLLRN 250

Query: 256 LCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEAMVGKAIGAKDDR 315
           L LQ   +F+T QGA  G+   A NA+LM F ++I+ G+DG AY +EA+VG+A GA D  
Sbjct: 251 LALQGCLAFLTIQGARYGETSAAVNAILMQFFVLIALGLDGIAYGVEALVGEAKGASDSS 310

Query: 316 QLRTAMISSTFWATMICLLLSLIFLGFGSDLIQMITNIPSVQATAEHYLPWLVAMPLIAV 375
           +++        W+++  L+ SLIF   G  +I ++T    +   A  YL  +V +PL+A 
Sbjct: 311 EVKRRTYQGLVWSSIFALIYSLIFFAGGEAIIALLTEHSDIVKAALPYLDLMVLLPLLAH 370

Query: 376 WCFLLDGVFIGATKGKEMRNSMAVSAV-AFFAIYGFMTHYGNHALWLAMLSFMALRGFTL 434
           WCFL DGVF+G T+   MRN+M +SA+  +F ++      GN +LW A+L+F+  RG TL
Sbjct: 371 WCFLYDGVFVGLTRASAMRNTMIISALGVYFPVWYLTQDQGNVSLWYALLAFLLARGMTL 430

Query: 435 GATFY 439
             +FY
Sbjct: 431 AWSFY 435