Pairwise Alignments

Query, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., Na(+)/drug antiporter from Alteromonas macleodii MIT1002

 Score = 60.1 bits (144), Expect = 1e-13
 Identities = 88/364 (24%), Positives = 150/364 (41%), Gaps = 32/364 (8%)

Query: 18  RQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFLR-- 75
           R +L +A P++++ IT  L+G+ D  + G    A  +  VALG    S+T  LL F++  
Sbjct: 11  RDILKLAWPLLVAQITQMLMGVSDTIMAGRYS-ATDMAAVALG---FSITVPLLCFIQGI 66

Query: 76  -MSTTGLTAQAHGAQNSQQLARVLLQGS--VIALGLAALFLLFHRPVAELIFHFSDASSE 132
            ++   + ++  G +N   +A    Q    V  +GLA   L+   P  E I      + E
Sbjct: 67  ALALPPIISRLQGNKNLSGIADASQQAGYLVFFVGLAVAGLI---PFTESIVALFPMAPE 123

Query: 133 VKTYAEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLGL 192
           + T    Y     ++ P   L   L  +  G    +  M + +I  + NIV + L + G+
Sbjct: 124 LFTITVDYVLYVLFAMPGFALYQWLRNYCEGLGKTKPTMIITVIGLMANIVGNYLFIYGV 183

Query: 193 G----LKVEGAAIASVIADYAGLLFGLLCVGRYWRQHQLPAPFSFIPSLTKE----LSRL 244
           G    +   G  IA+ I  Y  L+  ++    Y R       ++    L K     ++R 
Sbjct: 184 GPLPAMGGAGCGIATAIVIYTMLIATVI----YVRFAPALQKYNLFGQLYKPNMVTINRT 239

Query: 245 VALNRDIFLRSLCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEAM 304
             +   I +  L    +FS +    A  G   VAA+ V ++F  ++         A    
Sbjct: 240 FKMGLPIAMTILFEVTLFSLVALLLAPFGATTVAAHQVALNFSALMFMFPMSIGMAAAIR 299

Query: 305 VGKAIGAKDDRQ----LRTAMISSTFWATMICLLLSLIFLGFGSDLIQMITNIPSVQATA 360
           +G  IG  + RQ     RTA++   F A       +L+  GF   +I + T+  +V   A
Sbjct: 300 IGYRIGQNNPRQAKIAARTAILIGFFTAACTA-SFTLVAKGF---IIGLYTSDEAVYTLA 355

Query: 361 EHYL 364
              L
Sbjct: 356 NALL 359