Pairwise Alignments

Query, 333 a.a., cytochrome C biogenesis protein CcsA from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  108 bits (271), Expect = 2e-28
 Identities = 92/286 (32%), Positives = 137/286 (47%), Gaps = 51/286 (17%)

Query: 45  ELGKKLYFDPRLSKSGFISCNSCHNLSMGGSDNLKT-------SIGHNW-QQGPINSPTV 96
           +LG  L+ DP LS +  ++C++CH  + G SD  ++       S+G +    G  N+PT 
Sbjct: 3   KLGAVLFDDPNLSMNRTMACSTCHMQAAGFSDARESEKVGRDVSLGDDGISLGDRNAPTA 62

Query: 97  LNSSL------NIA------QFWDGRAADLKEQAGGPIANPGEMAFTHTLAI-DVLQSIP 143
             +        N A      QFWDGRA+ L++QAGGP  NP EM      A+   L+  P
Sbjct: 63  AYAKFTPPFGKNAAGEYIGGQFWDGRASLLEDQAGGPPLNPVEMGMPDKAAVVKRLRENP 122

Query: 144 AYVSEFRLVFGKPTLDIDQ-----VTEAIAEFEKT--LVTPYSRFDQWLMGDDSAITAQE 196
            YV+ F   FGK     D+     +T+A+A FE++    T  S++D++L G++  +T QE
Sbjct: 123 DYVAAFGTQFGKDVFASDESAYAAMTKALASFERSDEFSTFDSKYDRFLRGEEK-LTDQE 181

Query: 197 LAGYELFKNSGCVACHNGSALGGNSFQKMGLIEPYQ-------TNNKVEGLS-------- 241
             G  L  ++    C+    + G    + GL   ++        N  V  ++        
Sbjct: 182 ELGRVLISSTQFTNCNTCHEIRGAKGLEDGLFTNHKYFNIGVPANTSVRAVNGSKPDAVD 241

Query: 242 -------AVTGADADRFKFKVPTLRNVALTYPYFHDGEAATLKDAV 280
                  AV G  A R KFKVPTLRNVA+T PY H+G    L+  V
Sbjct: 242 LGLAQNPAVAGDPAQRGKFKVPTLRNVAVTGPYMHNGVFKDLRTVV 287