Pairwise Alignments

Query, 544 a.a., ubiquinone biosynthesis protein UbiB from Vibrio cholerae E7946 ATCC 55056

Subject, 532 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score =  185 bits (469), Expect = 4e-51
 Identities = 140/451 (31%), Positives = 222/451 (49%), Gaps = 45/451 (9%)

Query: 5   ELKRLYRIVKVQLEYGLDELLPEHHLTRAPLLARKSLFWLRNQHADKALGDRLRLALQEL 64
           E  RL  ++++   +GL+ L      +R  LL  +S      Q  D +  +R+   L++L
Sbjct: 12  ERARLAELIQIMGRHGLNGLA-----SRLGLLPGRS-----EQPVDVSTPERVVALLRDL 61

Query: 65  GPVWIKFGQMMSTRRDLFPPHIADPLAMLQDKVAPFDGLQAKQLIEEELGAPLETWFDDF 124
           GPV +K GQ+++TR DL  P     L+ LQD+V P      +  I   LG+P+   F  F
Sbjct: 62  GPVAVKLGQVLATREDLLGPEWVRALSTLQDRVTPLPFEALEPTILAALGSPIADVFASF 121

Query: 125 DIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDADIKLMYRVARIVAKALPEAR 184
           D +P+A+ASIAQVH A L S+G +VV+KV RP I  ++DAD++++ R+AR+ A+  PE R
Sbjct: 122 DREPIAAASIAQVHAATL-SDGTEVVVKVRRPGIAERVDADLRMLRRIARLAARHSPEIR 180

Query: 185 RLKPVEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELYVPEVLTDFCNETVMVSER 244
           RL+P E++R + ++L  E+DL  EAA A +    F     +  P    D     + V +R
Sbjct: 181 RLRPDELLRFFAESLSQEMDLSAEAA-ACESIGAFLQPLGVRTPAFYWDQVGRRINVQQR 239

Query: 245 IYGIQV-----------SDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNV 293
           + G+ V           +D+AG++A+                  +  +  FHAD HPGNV
Sbjct: 240 LDGMPVRAILDGAGDCGADIAGIYADAV-------------LRMIIFNGRFHADPHPGNV 286

Query: 294 FVNPNHPENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQLHVDSGWVPLDT 353
           FV      +     +D G VG L+   +  +    LA    D R V  + +   W  ++T
Sbjct: 287 FV----LADASLAFIDFGAVGVLSPARRNEVVTLVLAIAGEDSRSVTDVLLQ--W-SVET 339

Query: 354 NVDEFEVA--IRMVCEPIFAKPLCEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYV 411
           +VD   +   +  +        L +I    V   +F   R + + + P L LL +TLL  
Sbjct: 340 DVDRQALTRELDALIGQFRGAVLQQIELADVFGRVFALLRTYRLALPPDLALLLRTLLIA 399

Query: 412 EGLGRQLYPQLDLWQTAKPFLEKWMANQVGP 442
           EG  R+L P  D+   A P   + +  ++GP
Sbjct: 400 EGFVRRLDPGFDIAARAAPIARELLRERIGP 430