Pairwise Alignments

Query, 544 a.a., ubiquinone biosynthesis protein UbiB from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., Ubiquinone biosynthesis monooxygenase UbiB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  769 bits (1985), Expect = 0.0
 Identities = 380/546 (69%), Positives = 449/546 (82%), Gaps = 3/546 (0%)

Query: 1   MKPAELKRLYRIVKVQLEYGLDELLPEHHLTRAPLLARKSLFWLRNQHADKALGDRLRLA 60
           M P E++RLY I++  L YGLDEL+P   LT    L R SLFW+ N+H DK LG+RLRLA
Sbjct: 1   MTPGEVRRLYFIIRTFLSYGLDELIPRMRLTLPLRLWRYSLFWMPNRHKDKLLGERLRLA 60

Query: 61  LQELGPVWIKFGQMMSTRRDLFPPHIADPLAMLQDKVAPFDGLQAKQLIEEELGA-PLET 119
           LQELGPVWIKFGQM+STRRDLFPP IAD LA+LQDKVAPFDG  AK  IEE +G  P+E 
Sbjct: 61  LQELGPVWIKFGQMLSTRRDLFPPQIADQLALLQDKVAPFDGRLAKAQIEEAMGGLPVEA 120

Query: 120 WFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDADIKLMYRVARIVAKA 179
           WFDDFDI+PLASASIAQVHTA+LKSNG++VV+KVIRPDI P I AD+KL+YR+AR V + 
Sbjct: 121 WFDDFDIQPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIQADLKLIYRLARWVPRL 180

Query: 180 LPEARRLKPVEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELYVPEVLTDFCNETV 239
           LP+ RRL+P EVVREYEKTL+DEL+L RE+ANAIQLRRNFENS  LY+PEV +D+C++ +
Sbjct: 181 LPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNM 240

Query: 240 MVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPNH 299
           MV ERIYGI VSD+A L  NGTNMKLLAERGV VFFTQVFRDSFFHADMHPGN+FV+  H
Sbjct: 241 MVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEH 300

Query: 300 PENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQLHVDSGWVPLDTNVDEFE 359
           PENPQ+IG+DCGIVG+LN EDKRYLAENF+AFFNRDYR+VA+LHVDSGWVP DTNV++FE
Sbjct: 301 PENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEDFE 360

Query: 360 VAIRMVCEPIFAKPLCEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGLGRQLY 419
            AIR VCEPIF KPL EISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEG+GRQLY
Sbjct: 361 FAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLY 420

Query: 420 PQLDLWQTAKPFLEKWMANQVGPQAFLHALKERAPLWFEKMPELPELLYDSLKQGRNLNQ 479
           PQLDLW+TAKPFLE W+ +QVG  A   ALKE+AP W EKMPE+PEL+YDSL+QG+ L  
Sbjct: 421 PQLDLWKTAKPFLESWIKDQVGIPALTRALKEKAPFWVEKMPEIPELVYDSLRQGKYLQH 480

Query: 480 RLDNLYQGYRQSKRQQGTGKFLFGVGATLVVCSAIWISNQLE-PLAIGSATI-GVLCWLL 537
            +D + +  + +  +Q   ++L G+GATL++  +  + N+ E  L  G   + GV+ WL+
Sbjct: 481 SVDKIARELQVNHVRQSQSRYLLGIGATLLLSGSFLLVNRPEWGLMPGWLMVGGVVVWLV 540

Query: 538 SWRAYR 543
            WR  R
Sbjct: 541 GWRKTR 546