Pairwise Alignments

Query, 544 a.a., ubiquinone biosynthesis protein UbiB from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., putative ubiquinone biosynthesis protein UbiB (NCBI) from Escherichia coli BW25113

 Score =  765 bits (1975), Expect = 0.0
 Identities = 376/546 (68%), Positives = 447/546 (81%), Gaps = 3/546 (0%)

Query: 1   MKPAELKRLYRIVKVQLEYGLDELLPEHHLTRAPLLARKSLFWLRNQHADKALGDRLRLA 60
           M P E++RLY I++  L YGLDEL+P+  +T    L R SLFW+ N+H DK LG+RLRLA
Sbjct: 1   MTPGEVRRLYFIIRTFLSYGLDELIPKMRITLPLRLWRYSLFWMPNRHKDKLLGERLRLA 60

Query: 61  LQELGPVWIKFGQMMSTRRDLFPPHIADPLAMLQDKVAPFDGLQAKQLIEEELGA-PLET 119
           LQELGPVWIKFGQM+STRRDLFPPHIAD LA+LQDKVAPFDG  AKQ IE  +G  P+E 
Sbjct: 61  LQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEA 120

Query: 120 WFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDADIKLMYRVARIVAKA 179
           WFDDF+IKPLASASIAQVHTA+LKSNG++VV+KVIRPDI P I AD+KL+YR+AR V + 
Sbjct: 121 WFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLARWVPRL 180

Query: 180 LPEARRLKPVEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELYVPEVLTDFCNETV 239
           LP+ RRL+P EVVREYEKTL+DEL+L RE+ANAIQLRRNFE+S  LY+PEV  D+C+E +
Sbjct: 181 LPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGM 240

Query: 240 MVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPNH 299
           MV ERIYGI VSD+A L  NGTNMKLLAERGV VFFTQVFRDSFFHADMHPGN+FV+  H
Sbjct: 241 MVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEH 300

Query: 300 PENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQLHVDSGWVPLDTNVDEFE 359
           PENP++IG+DCGIVG+LN EDKRYLAENF+AFFNRDYR+VA+LHVDSGWVP DTNV+EFE
Sbjct: 301 PENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFE 360

Query: 360 VAIRMVCEPIFAKPLCEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGLGRQLY 419
            AIR VCEPIF KPL EISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEG+GRQLY
Sbjct: 361 FAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLY 420

Query: 420 PQLDLWQTAKPFLEKWMANQVGPQAFLHALKERAPLWFEKMPELPELLYDSLKQGRNLNQ 479
           PQLDLW+TAKPFLE W+ +QVG  A + A KE+AP W EKMPELPEL+YDSL+QG+ L  
Sbjct: 421 PQLDLWKTAKPFLESWIKDQVGIPALVRAFKEKAPFWVEKMPELPELVYDSLRQGKYLQH 480

Query: 480 RLDNLYQGYRQSKRQQGTGKFLFGVGATLVVCSAIWISNQLEPLAIGSATI--GVLCWLL 537
            +D + +  + +  +QG  ++  G+GATLV+     + ++ E   +    +  G++ W +
Sbjct: 481 SVDKIARELQSNHVRQGQSRYFLGIGATLVLSGTFLLVSRPEWGLMPGWLMAGGLIAWFV 540

Query: 538 SWRAYR 543
            WR  R
Sbjct: 541 GWRKTR 546