Pairwise Alignments

Query, 544 a.a., ubiquinone biosynthesis protein UbiB from Vibrio cholerae E7946 ATCC 55056

Subject, 524 a.a., ubiquinone biosynthesis protein from Agrobacterium fabrum C58

 Score =  293 bits (750), Expect = 1e-83
 Identities = 174/462 (37%), Positives = 258/462 (55%), Gaps = 8/462 (1%)

Query: 8   RLYRIVKVQLEYGLDELLPEHHLTRAPLLARKSLFWLRNQHADKAL-GDRLRLALQELGP 66
           RL R+  V +  G+   LP   L     L + +L       A +A   DRL +A++ LGP
Sbjct: 9   RLARVGWVLVREGVVLALPSDDLPAPAQLLKAALKPFARSKAKRAQRSDRLAVAVERLGP 68

Query: 67  VWIKFGQMMSTRRDLFPPHIADPLAMLQDKVAPFDGLQAKQLIEEELGAPLETWFDDFDI 126
            ++K GQ ++TR D+     AD LA LQD++A F    AK  IE  LG  +   + +F  
Sbjct: 69  SYVKMGQFLATRPDVVGADFADDLASLQDRMAFFPAAAAKANIEGSLGRSISELYREFG- 127

Query: 127 KPLASASIAQVHTAKLKS--NGRDVVLKVIRPDIRPQIDADIKLMYRVARIVAKALPEAR 184
            P+A+ASIAQVH A + +    R V +KVIRP +R +   D++ MY +A +  + +  AR
Sbjct: 128 DPIAAASIAQVHPAMVDTPKGPRKVAVKVIRPGVRQRFQNDLEAMYLIADLQQRFVRSAR 187

Query: 185 RLKPVEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELYVPEVLTDFCNETVMVSER 244
           RL+PVEV R  E+T   E+DLR EAA   +L  N        VPEV  +     V+  E 
Sbjct: 188 RLRPVEVTRTLEQTTKIEMDLRLEAAALSELAENTRQDPGFRVPEVDWERTGRDVVTMEW 247

Query: 245 IYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPNHPENPQ 304
           I G+++SD+ GL A G ++  LA+  +  F     RD FFHADMHPGN+FV+       +
Sbjct: 248 IDGVKMSDIEGLKAAGHDLNKLADTLIQSFLRHTLRDGFFHADMHPGNLFVDAKG----E 303

Query: 305 WIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQLHVDSGWVPLDTNVDEFEVAIRM 364
            + +D GI G L  +++R+LAE    F  RDY RVA++H ++G+VP   +   F  AIR 
Sbjct: 304 IVAVDMGIAGRLGKKERRFLAEILYGFITRDYMRVAEVHFEAGYVPGHHDKASFAQAIRA 363

Query: 365 VCEPIFAKPLCEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGLGRQLYPQLDL 424
           + EPI  +P   IS G +L  LF     F+ME +P+LV+LQKT++ VEG+ R L P+ ++
Sbjct: 364 IGEPIHGQPAETISMGKLLTLLFEVTELFDMETRPELVMLQKTMVVVEGVSRMLNPRFNM 423

Query: 425 WQTAKPFLEKWMANQVGPQAFLHALKERAPLWFEKMPELPEL 466
           W+ A P +  W+ + +GP+     LK+      +    +PE+
Sbjct: 424 WKAADPVVGGWIRDNLGPKRIATDLKDGVKAALKLAEAVPEI 465