Pairwise Alignments

Query, 510 a.a., DNA recombination protein RmuC from Vibrio cholerae E7946 ATCC 55056

Subject, 532 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 57.8 bits (138), Expect = 1e-12
 Identities = 106/466 (22%), Positives = 191/466 (40%), Gaps = 67/466 (14%)

Query: 56  QQLNEQLTTAQQELDELDALRDKNEFELKQSHGKLMAVLEKLRYFEAVKQERQQYADELN 115
           +Q  EQL+  +QE  +  A  +    E+ Q +    A  + LR    +++      D  +
Sbjct: 114 KQQGEQLSNMRQEAADGRAKLE----EVIQRNADSFAQTQTLR----LRETNDAVRDLSD 165

Query: 116 QVRAAKAELESQLREQEARHQQQLVASQEKLQLLERAEERLKQQFEHLANQVFEHKTATV 175
           ++ AA+ +  S+ RE       ++ A  E   +   A+E+L+        ++ +      
Sbjct: 166 RLLAAQEKGASEQREGLRTVTDRVGALMEANAI---AQEKLRDTVSSSLERIQK------ 216

Query: 176 DVQNRQSLEGLLTPLKEQLEG-FKKQVNDSFNHEAKERHTLVHELRNLQRLNEQMAKEAV 234
              N + LE +   + E+L+G  +K++ +SF   +     +   L  +Q L        V
Sbjct: 217 --DNSEKLESMRATVDEKLQGTLEKRLGESFQLVSDRLEQVHKGLGEMQTL-----ATGV 269

Query: 235 NLTQALKGDNKQQGNWGEVVLARVLAESGLREGHEYQTQVSLQNEAGK----------RY 284
              + + G+ K +G WGEV L  +L +   R+  +Y   V ++ ++G+          R 
Sbjct: 270 GDLKRVLGNVKSRGGWGEVQLGMLLEDMLTRD--QYSCNVKVRPDSGEIVEYAVKLPGRG 327

Query: 285 QPDVIVHLPQNKQVVIDSKMALVAYERYFHAE-----TDSERDSALREHLLALRNHIRGL 339
             D+ + LP      ID+K     Y+R   A+      D ER  +  E   A+R   + +
Sbjct: 328 GSDMPLWLP------IDAKFPHEDYDRLLQAQDAGVAEDIERAGSSLER--AVRLQAKTI 379

Query: 340 GQKDYHQLKGIQSLDYVLMFIPVEPAFQVAIQADPSLVNDAMEQNIILV-SPTTLLVALR 398
            +K  H      S D+ +M++P E  F   I+  P L  +   +  ++V  PTTL   L 
Sbjct: 380 CEKYVHP---PHSTDFAIMYLPTEGLFAEVIRR-PGLARELQTKYRVMVQGPTTLTALLS 435

Query: 399 TIDNLWRNERQNQNAQLIAERASKLYDKLRLFVEDMEGLGGALDKANQSYQGAMNKLVTG 458
           ++   +R          I +R+S+++  L     +        DK  +    A  K V  
Sbjct: 436 SLQMGFR-------TLAIEKRSSEVWQVLGAAKTEFSKYSQVWDKLGKQLDTA-KKTVDE 487

Query: 459 RGNAIRQAESFKQLGVEIKRSIPQP-LIERA--QQAPDQENAPLVE 501
            G   R  E  K   VE+      P L++ A      D ENA ++E
Sbjct: 488 AGRRTRAVER-KLREVEVLEGPETPALLDFAGNDSEDDHENAAMIE 532