Pairwise Alignments

Query, 510 a.a., DNA recombination protein RmuC from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 67.4 bits (163), Expect = 9e-16
 Identities = 89/352 (25%), Positives = 163/352 (46%), Gaps = 35/352 (9%)

Query: 81  FELKQSHGKLMAVLEKLRYFEAVKQERQQYADELNQVRAAKAELESQLREQEARHQQQLV 140
           F + ++     AVL  L +   V   RQ  A      RAA    E+  R++  R  ++LV
Sbjct: 13  FTVAEAAAVAAAVLALLLFLVLVSLVRQSRA------RAAVVAEEALRRDEMDRRLRELV 66

Query: 141 ASQEKLQLLERAEERLKQQFEHLANQVFEHKTATVDVQNRQSLEGLLTPLKEQLEGFKKQ 200
             Q +         R++   E LA +  E   A  D  ++ S       L E L    + 
Sbjct: 67  RVQSE------TAGRVQSMTEILAQRQSELARAVSDRLDQTSHR-----LGETLSTAARA 115

Query: 201 VNDSFNHEAKERHTLVHELRNLQRLNEQMAKEAVNLTQALKGDNKQ-QGNWGEVVLARVL 259
            ++S    A ER  +V      +R    ++ + V+L + L   NKQ +G +G+  +  ++
Sbjct: 116 THESLTRIA-ERLVMVE---TAERTLGDLSAQVVSLRETLA--NKQARGAFGQARMEAIV 169

Query: 260 AESGLREGHEYQTQVSLQNEAGKRYQPDVIVHLPQN-KQVVIDSKMALVAYERYFHAETD 318
           A+ GL  G  +  Q +L N  GKR  PD  + LP + + +++DSK  L A   +  A + 
Sbjct: 170 AD-GLPRG-SFAFQYTLSN--GKR--PDCAIFLPGDPRPLLVDSKFPLEAVTAFREAPSA 223

Query: 319 SERDSALREHLLALRNHIRGLGQKDYHQLKGIQSLDYVLMFIPVEPAFQVAIQADPSLVN 378
             R +A +     L  H+  + ++ +  + G ++ D  L+F+P E  +    +   ++V 
Sbjct: 224 EHRKAAGQRLRNDLLKHVYDVAERYF--IPG-ETQDVALIFVPSESVYAEISEHFDAVVQ 280

Query: 379 DAMEQNIILVSPTTLLVALRTIDNLWRNERQNQNAQLI-AERASKLYDKLRL 429
           +A    ++LVSP+ L++A++ +  + ++ R  + A  + AE A+ + D  RL
Sbjct: 281 EAYRLRVVLVSPSLLMLAVQVVQAIAKDARMREEADRVRAEVAALVGDVSRL 332