Pairwise Alignments

Query, 510 a.a., DNA recombination protein RmuC from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., DNA recombination limiting inversions protein from Pseudomonas putida KT2440

 Score =  359 bits (921), Expect = e-103
 Identities = 200/484 (41%), Positives = 307/484 (63%), Gaps = 18/484 (3%)

Query: 11  LWSALVSAGATGVAIGWWVKQRYQLKTQLLEQQLEQQSHWHAQQIQQ--LNEQLTTAQQE 68
           L S L+   A  +    WV Q  + +     +Q   +   +A Q+ Q  L  QL  ++ E
Sbjct: 5   LASILLGLVAGAIPCLVWVMQVQRRQGARQAEQALLEERLNAAQLAQAGLQAQLDASRDE 64

Query: 69  LDELDALRDKNEFELK-QSHGKLMAVLEKLRYFEAVKQ---ERQQYADELNQVRAAKAEL 124
           + +L       + +L  QS    +  +++    +A      ER     EL ++ A  A L
Sbjct: 65  VSDLSEANAVKQAQLAAQSRELELLQIDRDNARDAAHAWSLERANREAELRRLEAQTARL 124

Query: 125 ESQLREQEARHQQQLVASQEKLQLLERAEERLKQQFEHLANQVFEHKTATVDVQNRQSLE 184
           +++LREQ+  HQQ       +L+ L+ A + L+ QF  +A ++F+ +       ++Q L 
Sbjct: 125 DAELREQQESHQQ-------RLEDLQEARDTLRAQFADMATKIFDEREQRFAQTSQQHLG 177

Query: 185 GLLTPLKEQLEGFKKQVNDSFNHEAKERHTLVHELRNLQRLNEQMAKEAVNLTQALKGDN 244
            LL PLKE+++ F+K+V +S+  EA+ER +L  EL  LQ+LN +++ EA NLTQALKG  
Sbjct: 178 QLLDPLKERIQAFEKRVEESYQQEARERFSLGKELERLQQLNLRLSDEATNLTQALKGQ- 236

Query: 245 KQQGNWGEVVLARVLAESGLREGHEYQTQVSLQNEAGKRYQPDVIVHLPQNKQVVIDSKM 304
           K QGNWGE++L RVL  +GL +G EYQTQVSL++  G+R+QPDV++ LP +KQVV+D+K+
Sbjct: 237 KTQGNWGELILERVLEHAGLEKGREYQTQVSLKSADGERFQPDVLIMLPGDKQVVVDAKV 296

Query: 305 ALVAYERYFHAETDSERDSALREHLLALRNHIRGLGQKDYHQLKGIQSLDYVLMFIPVEP 364
           +L AY++ F A  D   + AL++H+ +LR+H++GL  KDY +L+G+ SLD+VL+F+P+E 
Sbjct: 297 SLTAYQQ-FVAGND---EVALKQHVQSLRSHVKGLSSKDYSRLEGLHSLDFVLLFVPIEA 352

Query: 365 AFQVAIQADPSLVNDAMEQNIILVSPTTLLVALRTIDNLWRNERQNQNAQLIAERASKLY 424
           AF  A+QA+P+L  +A ++ I++VSPTTLL  LR ID+LW+ ERQ QNA+ IAERA  LY
Sbjct: 353 AFSAALQAEPNLFQEAFDRQIVIVSPTTLLATLRVIDSLWKQERQGQNAREIAERAGWLY 412

Query: 425 DKLRLFVEDMEGLGGALDKANQSYQGAMNKLVTGRGNAIRQAESFKQLGVEIKRSIPQPL 484
           DK  LF++D++ LG  L + +++Y  A NKL  GRGN + ++E  K LG    +S+P  L
Sbjct: 413 DKFVLFIQDLDELGSRLQQVDKAYAAARNKLCEGRGNLVSRSEQLKLLGARASKSLPADL 472

Query: 485 IERA 488
           +ERA
Sbjct: 473 LERA 476