Pairwise Alignments

Query, 510 a.a., DNA recombination protein RmuC from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., DNA recombination protein RmuC from Escherichia coli ECRC62

 Score =  476 bits (1225), Expect = e-139
 Identities = 243/443 (54%), Positives = 325/443 (73%), Gaps = 8/443 (1%)

Query: 65  AQQELDELDALRDKNEFELKQSHGKLMAVLEKLRYFEAVKQERQQYADELNQVRAAKAEL 124
           AQQ+ ++L         E ++   +L A  +++   E  + E +   +E+  +++    L
Sbjct: 28  AQQKAEQLA--------EREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSL 79

Query: 125 ESQLREQEARHQQQLVASQEKLQLLERAEERLKQQFEHLANQVFEHKTATVDVQNRQSLE 184
           E+ LRE   R +     + +K++ +  +E+RL +QFE+LAN++FEH    VD QNRQSL 
Sbjct: 80  EADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLN 139

Query: 185 GLLTPLKEQLEGFKKQVNDSFNHEAKERHTLVHELRNLQRLNEQMAKEAVNLTQALKGDN 244
            LL+PL+EQL+GF++QV DSF  EA+ERHTL HE+RNLQ+LN QMA+EA+NLT+ALKGDN
Sbjct: 140 SLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDN 199

Query: 245 KQQGNWGEVVLARVLAESGLREGHEYQTQVSLQNEAGKRYQPDVIVHLPQNKQVVIDSKM 304
           K QGNWGEVVL RVL  SGLREG+EY+TQVS++N+A  R QPDVIV LPQ K VVID+KM
Sbjct: 200 KTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKM 259

Query: 305 ALVAYERYFHAETDSERDSALREHLLALRNHIRGLGQKDYHQLKGIQSLDYVLMFIPVEP 364
            LVAYERYF+AE D  R+SAL+EH+ ++RNHIR LG+KDY QL G+++LDYVLMFIPVEP
Sbjct: 260 TLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEP 319

Query: 365 AFQVAIQADPSLVNDAMEQNIILVSPTTLLVALRTIDNLWRNERQNQNAQLIAERASKLY 424
           AF +A+   P L+ +A++ NI+LVSPTTLLVALRTI NLWR E Q++NAQ IA+RASKLY
Sbjct: 320 AFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLY 379

Query: 425 DKLRLFVEDMEGLGGALDKANQSYQGAMNKLVTGRGNAIRQAESFKQLGVEIKRSIPQPL 484
           DK+RLF++DM  +G +LDKA  +Y+ AM KL +GRGN + QAE+F+ LGVEIKR I   L
Sbjct: 380 DKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDL 439

Query: 485 IERAQQAPDQENAPLVERHPIED 507
            E+A    ++     V   P ++
Sbjct: 440 AEQAVSQDEEYRLRSVPEQPNDE 462