Pairwise Alignments

Query, 141 a.a., universal stress protein UspA from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., Universal stress protein family from Pseudomonas putida KT2440

 Score = 40.4 bits (93), Expect = 2e-08
 Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 26/152 (17%)

Query: 2   SYQHLLVAVDLSEDSKLLVEKAVALAK------------PLNAEVSFIHIDVNYAELYTG 49
           +Y+ +LV VD S  S   +E A A+A             P  A V F H+D +    Y  
Sbjct: 169 AYRTVLVPVDFSSVSLRTIELAKAIAPQAEIILLHAYEAPFEASVRFAHLDHDTLTHYRN 228

Query: 50  LIDINLAETQHHAMEASQKQLQDLAQHANYPIKHTLVGSGDLTNELCETISEFNVDLLVC 109
           +I            + +Q QL  L++ A       ++  GD    + E   E   DL+V 
Sbjct: 229 VI-----------RKDAQVQLAALSEAAGLADARQILVHGDPGWRIAEQEQELECDLIVV 277

Query: 110 GHH-QDFWSKLL--SSTRQLINSSPVDMLVIP 138
           G        +LL  S T+ ++N S  D+LV P
Sbjct: 278 GKQGASALEELLVGSVTKHVLNESQCDVLVTP 309



 Score = 38.9 bits (89), Expect = 7e-08
 Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 20/147 (13%)

Query: 4   QHLLVAVDLSEDSKLLVEKAVALAKPLNAEVSFIHID-----VNYAELYTGLID-----I 53
           +H+LVA DLS  ++   E+A  L+    A +  +++          +L T   D     +
Sbjct: 23  KHILVATDLSPHARNAAERAAYLSDAQQASLDLLYVANPAPFERLKQLVTPDDDLLKRVL 82

Query: 54  NLAETQHHAMEASQKQLQDLAQHANYPIKHTLVGSGDLTNELCETISEFNVDLLVCG-HH 112
           + A  + HA+ A   Q   ++           V SG +  E+   + + + DLLVCG   
Sbjct: 83  DSAGEKTHALAALLFQRYGISAGVQ-------VASGSVITEINRVVQDKHSDLLVCGARG 135

Query: 113 QDFWSKLL--SSTRQLINSSPVDMLVI 137
           Q    +LL  S+ ++L+N  P  +LV+
Sbjct: 136 QSVARRLLLGSTVQKLLNRMPCPLLVV 162