Pairwise Alignments

Query, 261 a.a., ribosomal RNA small subunit methyltransferase J from Vibrio cholerae E7946 ATCC 55056

Subject, 238 a.a., Adenine-specific DNA methylase from Kangiella aquimarina DSM 16071

 Score =  187 bits (474), Expect = 2e-52
 Identities = 105/213 (49%), Positives = 141/213 (66%), Gaps = 7/213 (3%)

Query: 46  KLDEPKLGAIYVDWVEGAVAHRRKFGGGKGQSIAKAAGLNKGVTPVVLDATAGLGRDAFV 105
           KLD    G   +D+ +GA+A RR  GGG+ Q IAKA GL     P +LDAT GLGRDA  
Sbjct: 31  KLDGHATG-FSLDFTQGAIAWRRSHGGGRKQQIAKACGLKHNWQPSILDATGGLGRDASE 89

Query: 106 LASLGCRVQMVERHPVVAALLEDGLQRAKQDDEIGAWVSERISLLHASSHDALQQLASDP 165
           L +LGCR++++ER P VAALL+D + RA    +     +    L    +++ + +L++D 
Sbjct: 90  LRNLGCRLRLIERSPYVAALLQDAIARAASHLDTQELFARDFQLFQGQANELIPKLSTD- 148

Query: 166 NFTSPDVVYLDPMYPHPENKKKTALVKKEMRVFQSLVGADNDADALLEPALQLAQKRVVV 225
               PD++YLDPM+P P N  K+A VKKEMR+ + LVG D DAD LL  AL+ A+ RVVV
Sbjct: 149 --QQPDIIYLDPMFP-PRN--KSAAVKKEMRLVKLLVGEDLDADELLPLALEHAKYRVVV 203

Query: 226 KRPDYAPWLGNRKPSMAMETKKNRFDVYVIAAM 258
           KRP YAP+L  +KPSM++E+K NRFDVYV  A+
Sbjct: 204 KRPTYAPYLNQQKPSMSIESKANRFDVYVKQAI 236