Pairwise Alignments

Query, 261 a.a., ribosomal RNA small subunit methyltransferase J from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ from Escherichia coli ECRC101

 Score =  285 bits (728), Expect = 8e-82
 Identities = 151/238 (63%), Positives = 180/238 (75%), Gaps = 8/238 (3%)

Query: 16  LEQIAARWQLQASDDSPFALVLSEERLELRKLDEPKLGAIYVDWVEGAVAHRRKFGGGKG 75
           L  +AARW L+  +D+  ALVL+ E LELRK DEPKLG I+VD+V GA+AHRRKFGGG+G
Sbjct: 16  LSVLAARWGLEHDEDNLMALVLTPEHLELRKRDEPKLGGIFVDFVGGAMAHRRKFGGGRG 75

Query: 76  QSIAKAAGLNKGVTPVVLDATAGLGRDAFVLASLGCRVQMVERHPVVAALLEDGLQRAKQ 135
           +++AKA G+     P V+DATAGLGRDAFVLAS+GCRV+M+ER+PVVAALL+DGL R   
Sbjct: 76  EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYA 135

Query: 136 DDEIGAWVSERISLLHASSHDALQQLASDPNFTSPDVVYLDPMYPHPENKKKTALVKKEM 195
           D EIG W+ ER+ L+HASS  AL  +        P VVYLDPM+PH   K+K+ALVKKEM
Sbjct: 136 DAEIGGWLQERLQLIHASSLTALTDIT-----PRPQVVYLDPMFPH---KQKSALVKKEM 187

Query: 196 RVFQSLVGADNDADALLEPALQLAQKRVVVKRPDYAPWLGNRKPSMAMETKKNRFDVY 253
           RVFQSLVG D DAD LLEPA  LA KRVVVKRPDYAP L N     A+ TK +RFD+Y
Sbjct: 188 RVFQSLVGPDLDADGLLEPARLLATKRVVVKRPDYAPPLANVATPNAVVTKGHRFDIY 245