Pairwise Alignments

Query, 261 a.a., ribosomal RNA small subunit methyltransferase J from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ from Dickeya dianthicola ME23

 Score =  301 bits (770), Expect = 1e-86
 Identities = 159/254 (62%), Positives = 193/254 (75%), Gaps = 8/254 (3%)

Query: 1   MLIQLICQAPQRAQELEQIAARWQLQASDDSPFALVLSEERLELRKLDEPKLGAIYVDWV 60
           M I L+ +A    + L  +A RW L+    +   LVL+ ERLELRK DEPKLGAI VD+ 
Sbjct: 1   MRIGLLTEAGADPEALAILAQRWGLENDAGASLTLVLTPERLELRKGDEPKLGAICVDFA 60

Query: 61  EGAVAHRRKFGGGKGQSIAKAAGLNKGVTPVVLDATAGLGRDAFVLASLGCRVQMVERHP 120
            GA+AHRR+FGGG+G+++AKA G+ K   P V+DATAGLGRDAFVLA+LGCRV+MVERHP
Sbjct: 61  AGAMAHRRRFGGGRGEAVAKAVGIKKDYLPEVVDATAGLGRDAFVLAALGCRVRMVERHP 120

Query: 121 VVAALLEDGLQRAKQDDEIGAWVSERISLLHASSHDALQQLASDPNFTSPDVVYLDPMYP 180
           VVAALLEDGLQR  QD EIG W+ ER++L+HASS DAL  +        PDVVYLDPM+P
Sbjct: 121 VVAALLEDGLQRGYQDPEIGGWLRERLTLVHASSIDALSAIT-----PPPDVVYLDPMFP 175

Query: 181 HPENKKKTALVKKEMRVFQSLVGADNDADALLEPALQLAQKRVVVKRPDYAPWLGNRKPS 240
           H   ++K+ALVKKEMRVFQ+LVGAD+DADALL PA +LA+KRVVVKRPDYAP L      
Sbjct: 176 H---RQKSALVKKEMRVFQTLVGADDDADALLAPARRLAKKRVVVKRPDYAPPLAGVPAQ 232

Query: 241 MAMETKKNRFDVYV 254
            A+ETK +RFD Y+
Sbjct: 233 SALETKSHRFDFYL 246