Pairwise Alignments

Query, 261 a.a., ribosomal RNA small subunit methyltransferase J from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., Ribosomal RNA small subunit methyltransferase J from Acinetobacter radioresistens SK82

 Score =  111 bits (277), Expect = 2e-29
 Identities = 79/203 (38%), Positives = 114/203 (56%), Gaps = 15/203 (7%)

Query: 58  DWVEGAVAHRRKFGGGKGQSIAKAAGLNKGVTPVVLDATAGLGRDAFVLASLGCRVQMVE 117
           DW   A   R K    K + +A+A  L  G  P ++DATAGLG D+ ++A LG  V +VE
Sbjct: 67  DWK--AEIPRLKRASLKSEMLARACQL--GEKPQLIDATAGLGHDSLLMAHLGAEVTLVE 122

Query: 118 RHPVVAALLEDGLQRAKQDDEIGAWVSERISLLHASSHDALQQLASDPNFTSPDVVYLDP 177
           RHP++  LLE+ L +A+ D  + +  + RI L+ A S D L+Q  +  +    DVVYLDP
Sbjct: 123 RHPILFTLLEESLAQAQTDAFLNS-AAARIKLVFADSADYLRQQTARQH--RIDVVYLDP 179

Query: 178 MYP----HPENKKKTALVKKEMRVFQSLVGADNDADALLEPALQLAQ---KRVVVKRPDY 230
           M+P    + ++ KK A VKK+M++   L+    + D L +  L LAQ   KRV+VKRP +
Sbjct: 180 MFPQRDQNQQDHKKQAQVKKQMQLLHMLLPEQGEMD-LGDELLSLAQAVAKRVIVKRPRH 238

Query: 231 APWLGNRKPSMAMETKKNRFDVY 253
           A +L  + P         RFD Y
Sbjct: 239 AGFLAEQTPDHQWLGDACRFDAY 261