Pairwise Alignments

Query, 768 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1283 a.a., diguanylate phosphodiesterase from Pseudomonas simiae WCS417

 Score =  238 bits (608), Expect = 1e-66
 Identities = 163/543 (30%), Positives = 267/543 (49%), Gaps = 14/543 (2%)

Query: 222  YDQQPVMMLTLDERNHIQQVNHFAEQLLGYPADVMLGHHIRDFYQDEEVLTPRQMLLLPS 281
            ++     +L  D   +I Q N    ++ GY    +L   + +    +E        +L  
Sbjct: 729  FEHSTSAILITDPAGYIVQANEAFSRVSGYAVSDVLDQ-LPNMLTVDEQQEAHLRYVLKQ 787

Query: 282  RHASSVWRREVCYRHHSGETVWVRENIRPLVET----GTLLIVGEDITETRQLADQLAYQ 337
             H  S W  EV  +  +GE       I  + +      + +    DI+E +    ++   
Sbjct: 788  LHQHSTWEGEVWLKRRNGEHYPAWVGITAVFDDEGDLASYVCFFSDISERKASEQRIHRL 847

Query: 338  ARYDLLTHTLNRNQFELELAKALKETDSQLRTHAMLYLDLDQLKVLNDTAGHDAGDGAIQ 397
            A YD LTH  NR  F+  L  AL+  + Q     +++LDLD+ K +ND+ GH AGD  ++
Sbjct: 848  AYYDALTHLPNRTLFQDRLHTALQAAERQKSWVVLMFLDLDRFKPINDSLGHAAGDRMLK 907

Query: 398  FCASMLEDVLPFKATLARMGGDEFSVLLRDCTERD-----AVLVAQSIIHALSEVAFVWE 452
              A+ L   +    T+ARMGGDEF++LL+    R+     A+ VA+ I+ +L +  FV E
Sbjct: 908  EMATRLLGCVAEDDTVARMGGDEFTLLLQPRVNREMALNRAIHVAEQILASLVK-PFVLE 966

Query: 453  HIRFNLTCSIGIRMIDHTATSPQMVHAQADTACHAAKEEGRNRFNLYRQDDEDLRRRQLE 512
               F +T SIGI +          +   ADTA + AKE G+N F  Y+ D       +LE
Sbjct: 967  GREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKERGKNNFQFYQADMNASALERLE 1026

Query: 513  MESVNLVHDALANERIELFAQRIVPLNQPDVLLHFEVLVRIKNAAGEYVSPGIFVPASER 572
            +ES +L H    NE +  +  +         L   E L+R ++     V PG F+P  E 
Sbjct: 1027 LES-DLRHALEQNEFVLYYQPQFS--GDGKRLTGAEALLRWRHPRRGLVPPGDFIPVLEE 1083

Query: 573  YNLAHRLDRKIVEQTFNWLEARPQVLDKLGRVSINLSGNSIGNPDFVAFLLERLRDSRIP 632
              L   +   ++ +    L+   Q   ++ +VS+N+S     +      +   L+D+ +P
Sbjct: 1084 LGLVVDVGDWVISEACRQLKTWHQNKVRVPKVSVNISARQFSDGQLGTRIATILKDTGLP 1143

Query: 633  CSKVCFEITETAAMRNLNQAIKVLSQLKSLGCVLALDDFGSGLSSFGYLQKLPVDIVKID 692
             + +  E+TE+  MR +N+A+++L  LK+LG  +A+DDFG+G SS  YL++ P+D++KID
Sbjct: 1144 PACLELELTESILMREVNEAMQILDSLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKID 1203

Query: 693  GIFVCDMDKNEMDRLMVRSIHELTKQMGKSTVAEFVENQQILEALQQIGVDYAQGYLFSR 752
              FV  +   E D  + R+I  +   +  + +AE VE  + L+ L++ G D  QGYLF R
Sbjct: 1204 RTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDEVQGYLFGR 1263

Query: 753  PQP 755
            P P
Sbjct: 1264 PMP 1266



 Score = 36.2 bits (82), Expect = 1e-05
 Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 38/194 (19%)

Query: 194 ILLEAQDITWRKITEDKLFQREASLR--------HYYDQQPVMMLTLDERNH-------- 237
           ++L   DIT RK+ E  L +RE+           H Y Q  +    +   +H        
Sbjct: 432 VILSISDITSRKLIELSLVERESFWSDVVRTVPDHLYVQDVISQRMIFSNHHLGHTLGYN 491

Query: 238 ---IQQVNHFAEQLLGYPADVMLGHHIRDFYQDEEVLTPRQMLLLPSRHASSVWRREVCY 294
              +QQ+  +  ++L +P D    H +R   Q +   T +    L  RH ++ WR     
Sbjct: 492 KAELQQMGEYFWEILLHPEDAEHYHDLRQ-QQRQIGYTTQLQCQLRFRHRNNQWR----- 545

Query: 295 RHHSGETVWVRENIRPLVETGTLLIVGEDITETRQLADQLA-YQARYDLLTHTLNRNQFE 353
           R    E    R+      +   ++ V +DIT+  + ++ L   + RY +L  +       
Sbjct: 546 RFDIREQALARDK---TTQISRIIGVAKDITDQIEASESLRDSEQRYRMLAES------- 595

Query: 354 LELAKALKETDSQL 367
             ++  +  TDSQL
Sbjct: 596 --ISDVICSTDSQL 607