Pairwise Alignments

Query, 768 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 946 a.a., Cyclic di-GMP phosphodiesterase Gmr from Alteromonas macleodii MIT1002

 Score =  340 bits (871), Expect = 3e-97
 Identities = 204/556 (36%), Positives = 309/556 (55%), Gaps = 21/556 (3%)

Query: 216 ASLRHYYD---QQPVMMLTLDERNHIQQVNHFAEQLLGYPADVML---GHHIRDFYQDEE 269
           +SL H+YD          T      +  VN    ++ GY  +  +   G   + FY   E
Sbjct: 397 SSLNHFYDLFRNSAEGHYTSTWDGKLISVNPAMCKVFGYENEEEMLSEGASTKAFYASPE 456

Query: 270 VLTPRQMLLLPSRHASSVWRREVCYRHHSGETVW------VRENIRPLVETGTLLIVGED 323
               R +LL        V R+E+  +   G   W      +REN       G+++    D
Sbjct: 457 ---DRHVLLGEISQQGHVTRKEIRGKRRDGTEFWFSLSCQIRENDEGTYLYGSII----D 509

Query: 324 ITETRQLADQLAYQARYDLLTHTLNRNQFELELAKALKETDSQLRTHAMLYLDLDQLKVL 383
           ITE +Q    L Y A +D LT   NR QFE  + K      S L    +L+LDLD+ KV+
Sbjct: 510 ITEKKQSDLSLQYLATHDSLTGVYNRRQFE-SVFKEKVHNHSALPV-CILFLDLDRFKVV 567

Query: 384 NDTAGHDAGDGAIQFCASMLEDVLPFKATLARMGGDEFSVLLRDCTERDAVLVAQSIIHA 443
           NDT GH AGD  I+  A ++E+ L   A LAR+GGDEF V+  D       L A  I++A
Sbjct: 568 NDTCGHKAGDVLIKDVARLIENTLLPNAQLARLGGDEFGVIYSDLDADAVYLNAVKILNA 627

Query: 444 LSEVAFVWEHIRFNLTCSIGIRMIDHTATSPQMVHAQADTACHAAKEEGRNRFNLYRQDD 503
           +    F+W++  FNL  SIG+ + D +  S     + AD AC+ AKE+GRN+ + Y +DD
Sbjct: 628 VQAYRFMWDNRIFNLGVSIGMVVCDDSNVSSGQYLSMADAACYFAKEQGRNQVHKYNKDD 687

Query: 504 EDLRRRQLEMESVNLVHDALANERIELFAQRIVPLNQPDVLLHFEVLVRIKNAAGEYVSP 563
           E+++R Q E++ V+ +++AL   R EL+ Q + PL++     ++EVL+R++   G+ V P
Sbjct: 688 ENMQRYQRELDWVSSINNALEEGRFELYYQSLRPLSKASDGHYYEVLLRLREKDGKIVEP 747

Query: 564 GIFVPASERYNLAHRLDRKIVEQTFNWLEARPQVLDKLGRVSINLSGNSIGNPDFVAFLL 623
             F+P +ER+ +   +D+ +V  TF WL   P+ L +L R SINL+ +S+ + DF  F+L
Sbjct: 748 ANFLPTAERFEMNVNVDKWVVTNTFKWLSENPEHLAELRRCSINLNCHSLADRDFTLFIL 807

Query: 624 ERLRDSRIPCSKVCFEITETAAMRNLNQAIKVLSQLKSLGCVLALDDFGSGLSSFGYLQK 683
                  IP +K+CFE+ E+ A+  +   +  +     LGC  ALDDFGSG SS+ YL+ 
Sbjct: 808 NAFETFNIPYNKICFEVIESVAIIKMEDTLAFMRTFNRLGCSFALDDFGSGFSSYSYLKS 867

Query: 684 LPVDIVKIDGIFVCDMDKNEMDRLMVRSIHELTKQMGKSTVAEFVENQQILEALQQIGVD 743
           LPV+ VKIDG+F+ DM  + +D  MV SI+++ K MG  TV EFVEN+  +  L ++GVD
Sbjct: 868 LPVNQVKIDGMFIKDMLNDSVDTAMVASINDVAKAMGMQTVGEFVENEGTMAQLGKMGVD 927

Query: 744 YAQGYLFSRPQPIADW 759
           +AQGY  ++P P+ ++
Sbjct: 928 FAQGYSVAKPAPLREF 943