Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., Bicyclomycin resistance protein from Xanthobacter sp. DMC5

 Score =  179 bits (454), Expect = 1e-49
 Identities = 122/394 (30%), Positives = 203/394 (51%), Gaps = 19/394 (4%)

Query: 2   KQAMPSQVSKQQMVLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMG 61
           +Q  P    ++  ++  ++V+  P+++ +Y PALP + + F    A  + T+T F F   
Sbjct: 11  QQRAPLMTEREVSIIGGMMVMLGPVSLSLYTPALPTLVEVFGTSIATVKLTLTVFFFGFA 70

Query: 62  VGQLFAGPLADKYGRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAA 121
           V QL  GPL+D YGRR VALG   IY   A++A  A +I W++  R+LQG+GA A    +
Sbjct: 71  VSQLICGPLSDAYGRRPVALGFFGIYLSGAVVAMLAPTIGWLVAGRILQGIGAAAGIALS 130

Query: 122 FATVRDLFGPQRSGKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGL 181
            A VRD +  Q S ++++ +   +   PA++P +G +L   FGW + F  MT F L +  
Sbjct: 131 RALVRDQYTGQASARVMNLIGTILAIGPAISPTIGGFLLGAFGWHSVFVAMTCFGLALMT 190

Query: 182 AMALRLQESN----PYMGSRPAVFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAP 237
            + LR+ E+N    P + +  AV   + Y  +L    F+  A     A+  I     + P
Sbjct: 191 LLLLRVPETNRTPDPRLAAPRAV--AASYRRLLSDRGFMRAALTAGSALGGIYTLAAALP 248

Query: 238 VILMERLQLSMNEFTFWFGVNAVINIIACMTAPKVMDKLGTRW---SLIIGITTLMIAGS 294
            +L++R+ LS  +    FGV  ++   A M    +   L  R+    LI+    L++ G+
Sbjct: 249 FVLIDRVGLSPTQ----FGVAMMMQTGAFMFGTLIARPLLNRFKAQQLILPGLLLVLTGA 304

Query: 295 LMLVLRNQA---SALAFMLPVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMS 351
           + + +       S L+ MLP+   + G A +L      ALA FG  AG A+AL G  Q+ 
Sbjct: 305 IAMAVGPHVVALSTLSVMLPISFWACGCALLLPGCTTNALARFGSIAGAASALTGFLQI- 363

Query: 352 GSGLLVGTLQRIMPEPQLLIGLTMWLAAPALLIL 385
           GSG +  ++  ++P P  L+ +T+ + A A++ L
Sbjct: 364 GSGFIGTSISALLPSP--LLAMTILVPAMAVMAL 395