Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., major facilitator transporter from Pseudomonas simiae WCS417

 Score =  171 bits (433), Expect = 3e-47
 Identities = 109/364 (29%), Positives = 191/364 (52%), Gaps = 6/364 (1%)

Query: 14  MVLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPLADK 73
           +++L  L  F+PLAID YLP  P +++AF  +    Q T+  +   + +GQL  GPLAD+
Sbjct: 6   ILILGALSAFAPLAIDFYLPGFPAMAKAFATDEKHIQLTLAVYFGGLALGQLIYGPLADR 65

Query: 74  YGRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQR 133
           +GRR   L G++++ L++     A S+EW++ AR +Q LG CA  V + A V D      
Sbjct: 66  FGRRGPLLSGVTLFTLASFACAFAPSLEWLIGARFVQALGGCAGMVISRAVVSDKCDAVG 125

Query: 134 SGKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNP- 192
           S K+ S L       P LAP+ G  +   +GW++ F  ++ F+++  +A+A+ L E+ P 
Sbjct: 126 SAKVFSQLMLVTGLAPILAPLAGGLMVGLWGWQSIFLALSIFSVMAAIAVAVGLPETFPA 185

Query: 193 YMGSRPAVFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNEFT 252
           +   +P    L RYAA+L    +L +A    +++A + AY+  +P + ++   +    + 
Sbjct: 186 HQPRQPLSGSLRRYAALLSDRVYLGYALTGGISIAGMFAYIAGSPFVFIQLYGVPAEHYG 245

Query: 253 FWFGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAG-SLMLVLRNQASAL-AFML 310
           + FG NA   I+      +++ K G  + L   +   ++A  SL+ +   +  AL   ++
Sbjct: 246 WLFGSNAAGFILVAQVNARLLSKRGPAFLLSRSVWVYLLAALSLLGIASLRTDALWPLLV 305

Query: 311 PVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQM---SGSGLLVGTLQRIMPEP 367
           P+F+       IL   +  A++  G +AG+A+ALLG  Q    +G+  LVG L      P
Sbjct: 306 PLFICIASLGCILPNTSACAMSGQGARAGSASALLGCIQFGVAAGAASLVGVLHDGTAMP 365

Query: 368 QLLI 371
             ++
Sbjct: 366 MAMV 369