Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., major facilitator transporter from Pseudomonas simiae WCS417

 Score =  138 bits (347), Expect = 3e-37
 Identities = 101/373 (27%), Positives = 174/373 (46%), Gaps = 16/373 (4%)

Query: 10  SKQQMVLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGP 69
           S+  + LL  L     ++  + +P L  I QA       +   ++ F+ A G+GQL  GP
Sbjct: 8   SRSLLFLLVALTALGEVSTQLIIPGLGAIEQALAAPAGSSLMALSAFVAAFGLGQLLFGP 67

Query: 70  LADKYGRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLF 129
           L+D+ GRR V +GG+ +Y L+ L       IE  + AR+LQGLGACA  V A   VRD++
Sbjct: 68  LSDRIGRRPVLIGGLVLYGLATLSMLLVDDIEHFIAARVLQGLGACAALVLARTVVRDVW 127

Query: 130 ----GPQRSGKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMAL 185
               GP  +  MI  L   +     +AP++G  L +  GWRA          +V L + L
Sbjct: 128 KAEAGPALALTMIGMLYAIV-----VAPMVGGLLIKWLGWRAPIMLALAIGSVVLLVVLL 182

Query: 186 RLQESNPYMGSRPAVFKL--SRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMER 243
             +ESN Y+  +   ++    +Y  +L+   +   A         + A +  +  + +  
Sbjct: 183 FFRESNHYLDPKAGHWRSLGGQYLDLLRGRQYRAFAVALACTYGAMFAVIAGSSAVFINL 242

Query: 244 LQLSMNEFTFWFGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAG--SLMLVLRN 301
           L  S  E+   FG+   + I+      + + +LG +  + +G+  +   G  ++++    
Sbjct: 243 LGFSSLEYGINFGLIVSMLIVGSTYTRRNIMRLGPQRIVTMGVAMVAAGGVSAVVIYALF 302

Query: 302 QASALAFMLPVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMSG---SGLLVG 358
             S L   +P+ L ++G   +L  +    + P   +AG AA L+G  QM G   SG+L+ 
Sbjct: 303 GLSVLGLDIPIALVTLGGGLVLPGSVTGGVMPNAHRAGLAAGLMGFAQMFGATCSGVLLS 362

Query: 359 TLQRIMPEPQLLI 371
            L+     P ++I
Sbjct: 363 LLRDGSATPMIVI 375