Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 403 a.a., MFS transporter from Pseudomonas simiae WCS417

 Score =  139 bits (351), Expect = 1e-37
 Identities = 92/341 (26%), Positives = 158/341 (46%), Gaps = 5/341 (1%)

Query: 14  MVLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPLADK 73
           ++LLT L+    + +D++LPALP ++  FH   +  Q T+T +     +  L +GPL D+
Sbjct: 12  LMLLTALIALPRVTLDMHLPALPAMADYFHTSDSQLQLTLTLYALGSAISLLVSGPLTDR 71

Query: 74  YGRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQR 133
           +GRR V L G+ +Y L+      A ++  +++ARL Q LG C T+V     VRD F    
Sbjct: 72  FGRRPVLLVGLFLYVLATAACALADNLAVLIIARLFQALGGCCTTVIGRVMVRDYFDRDE 131

Query: 134 SGKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESN-P 192
             +++  ++ A+   P  AP+LGS +     WR  F  + G   ++   +  RL E+  P
Sbjct: 132 QARLLGLISMAMAISPMAAPVLGSLMLPFINWRGLFVLLGGIGAVLCGVVYRRLPETRPP 191

Query: 193 YMGSRPAVFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNEFT 252
            + + P    L  Y  +L+   FL +A       +    +++ +  +L     LS   + 
Sbjct: 192 EVAAAPPQGLLRLYGQLLRDRYFLRYALAIGCVYSTYFPFISESSALLQRGFHLSATAYA 251

Query: 253 FWFGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAGSLMLVLRNQA---SALAFM 309
             F       ++      +++ +      + +GI  L + GS+ L L   A     LA +
Sbjct: 252 LVFAATISGYMLGANLFRRLVRRFDPDRLIAVGI-GLNLLGSVTLALATTALPGEWLAIV 310

Query: 310 LPVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQM 350
           LP+ L  +     + A     L P+G  AGTA+ L    QM
Sbjct: 311 LPMVLIMVSVGMTIPACQLSVLQPYGAIAGTASGLFFFTQM 351