Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

 Score =  135 bits (339), Expect = 3e-36
 Identities = 97/344 (28%), Positives = 167/344 (48%), Gaps = 6/344 (1%)

Query: 16  LLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPLADKYG 75
           LL L+     LA+ I++PALP  +          Q T++ ++F + VGQL  GPLAD++G
Sbjct: 19  LLALVTFSGTLAMHIFVPALPIAAANLGAGIGAMQMTVSLYIFGLAVGQLVYGPLADRFG 78

Query: 76  RRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQRSG 135
           RR V L G++IY ++ L A  A  +  ++ ARL Q +G CA  V   + VRD   PQ + 
Sbjct: 79  RRPVLLCGLAIYCVAGLAAALAPEVHALITARLFQAIGGCAGLVLGRSIVRDTAEPQEAT 138

Query: 136 KMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNPYMG 195
           + ++ +N  +   P+LAP++G  L    GWR+ F  + G   +VG     R+       G
Sbjct: 139 RRLALMNLMVTIGPSLAPLIGGALATALGWRSIFYALFGLG-VVGFLFTWRMLPETGAPG 197

Query: 196 SRPAVFKLSR-YAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNEFTFW 254
           +      L+R Y  +L++P FL  +     A   + A++ SAP I +++L    +E   +
Sbjct: 198 AAVNARDLARNYGKLLRSPAFLGFSVGGGCATTSMYAFIASAPFIFVDQLHRPAHEAGIY 257

Query: 255 FGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAGSLMLV---LRNQASALAFMLP 311
             +      +       ++ ++     L+I    L +A + +L+   L +  S    +  
Sbjct: 258 LAILVSGVWLGSFLTSHLISRVRVD-RLMIRSNALSVAAAFVLLGAALGDHLSVPLIVAC 316

Query: 312 VFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMSGSGL 355
           +FL ++G      AA  +A++      G+A+ L G  QM+   L
Sbjct: 317 MFLFTVGAGMASPAALTQAISVNPQVIGSASGLYGFTQMAVGAL 360