Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 411 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

 Score =  132 bits (333), Expect = 1e-35
 Identities = 100/384 (26%), Positives = 182/384 (47%), Gaps = 6/384 (1%)

Query: 15  VLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPLADKY 74
           VLL +L +  P +ID Y+PA   I+Q+     A  Q T++ +LF      LF G L+D +
Sbjct: 18  VLLAVLGMLGPFSIDTYIPAFSGIAQSIGATPAEMQQTLSAYLFGFAFMNLFHGALSDSF 77

Query: 75  GRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQRS 134
           GRR V L G++++ L++L    +Q+I  +++ R LQGL   A  V + A +RD+F P  +
Sbjct: 78  GRRPVVLWGLAVFTLASLGCALSQNITQLVLFRGLQGLSTGAGIVVSRAVIRDMFPPAEA 137

Query: 135 GKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNPYM 194
            +++S +       PA+API+G +L    GW A F F+    +++  A    L E+    
Sbjct: 138 QRVMSQVTIYFGVAPAIAPIVGGFLFVHAGWHAVFWFLVAVGVVLFTANYKLLPETLHKD 197

Query: 195 GSRPAVFK--LSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNEFT 252
             +P   +  +  Y  +   P FL  A    +    +  YV +AP  L + L L   +F 
Sbjct: 198 HRQPFQVRHLMRGYWDLCSDPRFLLLAFASGVPFNGMFLYVLAAPAFLGDHLALQPQQF- 256

Query: 253 FWFGVNAVINI-IACMTAPKVMDKLGTRWSLIIGITTLMIAGSLMLVLRN--QASALAFM 309
           FWF +  +  I +    + ++  K+  +  +  G   ++I   + +V     QA     +
Sbjct: 257 FWFFLLTIGGIMLGARASGRMAGKVAPKRQIRDGFLIMLITSVVNVVANTFFQAHVAWAL 316

Query: 310 LPVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMSGSGLLVGTLQRIMPEPQL 369
            P+ + + G+A ++       L    ++ G A++L  +   + +G++ G +  ++    L
Sbjct: 317 WPLAVFAFGWALMVPVVTLLVLDLHPERRGMASSLQAVIGSTANGIVAGAVAPLVMHSTL 376

Query: 370 LIGLTMWLAAPALLILFSPLGFRW 393
            + LT        L+ +  L  RW
Sbjct: 377 ALALTSMAMLAIGLVAWVWLHGRW 400