Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

 Score =  144 bits (362), Expect = 6e-39
 Identities = 119/388 (30%), Positives = 186/388 (47%), Gaps = 32/388 (8%)

Query: 15  VLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPLADKY 74
           +LL LL    P AID+YLPALP I Q+ H +    Q ++T F  ++G GQL  GP++D  
Sbjct: 11  LLLGLLSAIGPFAIDMYLPALPAIGQSLHADIGAVQMSLTAFFLSLGAGQLLYGPISDMV 70

Query: 75  GRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQRS 134
           GR+     G+ ++AL+++    A  I+ +++ R +QGLGA A      A VRDL     +
Sbjct: 71  GRKPPLYAGLVLFALASVGCAVATDIQTLIVLRFVQGLGAAAGMAIPRAVVRDLHTGTDA 130

Query: 135 GKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNPYM 194
            +++S L       P LAP+ GS +    GWR  F  +T  A + GLAM ++L +     
Sbjct: 131 ARLMSLLMLVFSVSPILAPLAGSAVIAFAGWRGVFWAVT-IAAVAGLAMMVKLLDE---- 185

Query: 195 GSRPAVFK--------LSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQL 246
            +RPA  +        L+ Y  +L+   +L    +   AMA    Y+ ++  ++++   L
Sbjct: 186 -TRPASERVESSLGSALAAYWLLLRDRHYLGLVFIGSFAMAGFFTYLANSSFVMIDHYGL 244

Query: 247 SMNEFTFWFGVNAVINIIACMTAPKVMDKLGTRWSLI----IGITTLMIAGSLMLVLRNQ 302
           S   ++  FGVNA     A + A +    LG R+ L+     G+    +A   M +    
Sbjct: 245 SPAMYSVAFGVNAA----AFIAASQFTGSLGERYGLVNLVKFGVVCCGVAMVAMFIYFAT 300

Query: 303 ASALAFMLPV--FLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMSGSGL---LV 357
                ++L V  F++S     ++      AL   G  AGTA+ALLG  QM    L   +V
Sbjct: 301 GGDNIWVLIVLYFIASGFMGLVIPTTGVLALEMHGAIAGTASALLGTLQMLTGALAMAVV 360

Query: 358 GTLQRIMPEPQLLIGLTMWLAAPALLIL 385
           G      P P     +   +AA AL+ L
Sbjct: 361 GLFTDGRPLP-----MVAGMAAGALIAL 383