Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 411 a.a., multidrug effflux MFS transporter from Variovorax sp. OAS795

 Score =  133 bits (334), Expect = 1e-35
 Identities = 102/385 (26%), Positives = 190/385 (49%), Gaps = 8/385 (2%)

Query: 15  VLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPLADKY 74
           VLL +L +  P +ID Y+PA   I+++     A  Q T++ +LF      LF G L+D +
Sbjct: 18  VLLAVLGMLGPFSIDTYIPAFSGIARSIGATPAEMQQTLSAYLFGFAFMNLFHGALSDSF 77

Query: 75  GRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQRS 134
           GRR V L G++++ L++L    +Q+I  +++ R LQGL   A  V + A +RD+F P  +
Sbjct: 78  GRRPVVLWGLAVFTLASLGCALSQNIAQLVLFRGLQGLSTGAGIVVSRAVIRDMFPPADA 137

Query: 135 GKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNPYM 194
            +++S +       PA+API+G +L    GW A F F+    +++ +A    L E+    
Sbjct: 138 QRVMSQVTIYFGVAPAIAPIVGGFLFVHAGWHAIFWFLVAVGVILFVANYKLLPETLHQS 197

Query: 195 GSRPAVFK--LSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNEFT 252
             +P   +  +  Y  +   P FL  A    +    +  YV +AP  L + L L+  +F 
Sbjct: 198 QRQPFQVRHLMRGYWDLCSDPRFLLLAFASGVPFNGMFLYVLAAPAFLGDHLALAPTQF- 256

Query: 253 FWFGVNAVINIIA-CMTAPKVMDKLGTRWSLIIGITTLMIAGSLMLVLRN---QASALAF 308
           FWF +  +  I++    + ++  K+  +  +  G   +M+  SL+ V+ N    A A+  
Sbjct: 257 FWFFLLTIGGIMSGAWASGRMAGKVAPKRQIRDGF-LIMLVTSLVNVVANWLFTAHAVWA 315

Query: 309 MLPVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMSGSGLLVGTLQRIMPEPQ 368
           + P+ + + G+A ++       L    ++ G A++L  +   + +G++ G +  ++    
Sbjct: 316 LWPLAVFAFGWALMVPVVTLLVLDLHPERRGMASSLQAVIGSTANGVVAGVVAPLVMHST 375

Query: 369 LLIGLTMWLAAPALLILFSPLGFRW 393
           L + LT  L     L+ +  L  +W
Sbjct: 376 LALALTSTLMLGIGLVAWVWLHGQW 400