Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  130 bits (327), Expect = 7e-35
 Identities = 96/355 (27%), Positives = 168/355 (47%), Gaps = 13/355 (3%)

Query: 30  IYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPLADKYGRRTVALGGISIYAL 89
           +Y+P++  ++Q F V  A  Q  +  +L   G+ Q   G L+D+ GR+ + + G++IY +
Sbjct: 40  MYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSDRIGRKPIIIAGLAIYII 99

Query: 90  SALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQRSGKMISYLNGAICFIP 149
            +L+A  A    W L+   +QGLG       +    RD F      K+ S ++  + F P
Sbjct: 100 GSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSRDCFEGAELHKVNSLISMCLIFSP 159

Query: 150 ALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNPYMGSRPAVFKLSRYAAV 209
            +AP+LG +LT+ FGWR+++ F++ FA+ V + M   + E+ P   +R     L  Y  V
Sbjct: 160 LVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETLP-ATARKKEPVLRSYHYV 218

Query: 210 LKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNEFTFWFGVNAVINIIACMTA 269
           L    F  +    +   A +  +  +A V+L   L L     +  F    V+ I   +  
Sbjct: 219 LSDRRFQGYLICLVATFAGLAVFEAAAGVLLGGVLGLPATTVSLLF----VLPIPGYLAG 274

Query: 270 PKVMDKLGTRW----SLIIGITTLMIAGSLMLV---LRNQASALAFMLPVFLSSIGFAWI 322
             + + +   W    ++ +G+  + + GSL+++   L    +AL+ +    +  +G   +
Sbjct: 275 AWLSNVIARHWREKTAMHVGLLAI-LTGSLVIMLPGLLGMTTALSLIGGATIYFLGAGIL 333

Query: 323 LGAAAGKALAPFGDKAGTAAALLGLFQMSGSGLLVGTLQRIMPEPQLLIGLTMWL 377
             AA   AL+PF   AGT  A+LG  Q  G+GL            QL +G+ M L
Sbjct: 334 FPAATTGALSPFPYHAGTGGAILGGMQNLGAGLATLFAAMFPASDQLPLGIIMLL 388