Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  130 bits (326), Expect = 9e-35
 Identities = 110/387 (28%), Positives = 178/387 (45%), Gaps = 17/387 (4%)

Query: 1   MKQAMPSQVSKQQMVLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAM 60
           M     ++  +  M+L  +++    + + IYLP+LP IS+   V+ A AQ  +T FL   
Sbjct: 1   MNAQTSTRFRRTPMLLAMMIIATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGF 60

Query: 61  GVGQLFAGPLADKYGRRTVALGGISIYALSALL-AWSAQSIEWMLMARLLQGLGACATSV 119
           G  QLF G L+D  GRR   L G  IY L  +L    +   + +   RLLQGLGA + SV
Sbjct: 61  GGSQLFYGALSDAVGRRPTFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASV 120

Query: 120 AAFATVRDLFGPQRSGKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLV 179
              + +RD +      K +SYL+     +P +AP+LG WL     W++ F F+  +   +
Sbjct: 121 LGRSVLRDSYDGFHLTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAI 180

Query: 180 GLAMALRLQESNPYMGSRPAVFKL-SRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPV 238
                + L E+ PY   R     +   YA +L        AS   L+    L  ++  P 
Sbjct: 181 FTLGLMILPETLPYPKRRVQWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLSILPF 240

Query: 239 ILMERLQLSMNEFTFWFGVNAVINIIACMTAPKVMDKLGTRWSL--IIGIT-TLMIAGSL 295
           +L ++L ++  +    +G   +I     +    +++ L +R+S+  ++G   +LM+   L
Sbjct: 241 LLQKQLGMTAAD----YGSTLIIPSSGLLLGSVLVNMLTSRFSVRQLLGCAISLMVFAGL 296

Query: 296 MLVLRNQASALAFMLPVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMSGSGL 355
            L+L  + S    +      SI        A    L+P   +AG  +AL G  QM  +GL
Sbjct: 297 WLLL-TEFSVFNLIWAFTWLSIAQGISFPLATTLLLSPHKSQAGAVSALSGSIQMGIAGL 355

Query: 356 LVG-------TLQRIMPEPQLLIGLTM 375
           L G       T Q  M    +L+G+TM
Sbjct: 356 LGGYLVEHWVTSQNAMGVFYILVGITM 382