Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  147 bits (372), Expect = 4e-40
 Identities = 103/361 (28%), Positives = 180/361 (49%), Gaps = 9/361 (2%)

Query: 13  QMVLLTLLVL-----FSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFA 67
           QM LL  +VL      +PLAID+YLPA+P I++ F V     Q T+T +     +GQL  
Sbjct: 13  QMSLLLYIVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLH 72

Query: 68  GPLADKYGRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRD 127
           GPLAD +GRR V L GI ++ ++A+++ +   IE +   R  QG    A +V   A VRD
Sbjct: 73  GPLADSFGRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRD 132

Query: 128 LFGPQRSGKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRL 187
           +F  +   + +S++   +   P +AP++G  L   FGWR+ F  +  FA LV   +  ++
Sbjct: 133 MFDREDFARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKI 192

Query: 188 QESNPYMGSRPAVFK--LSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQ 245
            E+      +P  F+  +  Y  + K P  +        + A + A++T+   + ++   
Sbjct: 193 PETLSPENRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYG 252

Query: 246 LSMNEFTFWFGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAGSLMLVLRNQASA 305
           +S + F + FG+N V  I       + + K+G+   L   +   ++AG  + V       
Sbjct: 253 VSPDGFGYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLFVSWVLDWG 312

Query: 306 LAFMLPVFLSSIGFAWILGA-AAGKALAPFGDKAGTAAALLGLFQMSGSGLLVGTLQRIM 364
           L   +P  +  +G    +G+ + G  L+ +   AGTA++L G  +  G+G ++G +   +
Sbjct: 313 LWGTVPFVVLFVGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRF-GTGSIIGAVVAAL 371

Query: 365 P 365
           P
Sbjct: 372 P 372